Gene : Thecc1EG031522 T. cacao v1.1

Defline:  (1 of 1) KOG4837 - Uncharacterized conserved protein Genomic Order:  838
Name:  ? Thecc1EG031522 Secondary Identifier:  ? PAC:27445231

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031522 0.5kb upstream 0.5kb upstream 5113 true scaffold_7: 5341963-5347075 Theobroma cacao
Thecc1EG031522 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5341963-5342462 Theobroma cacao
Thecc1EG031522 0.5kb downstream 0.5kb downstream 5113 true scaffold_7: 5342463-5347575 Theobroma cacao
Thecc1EG031522 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5347076-5347575 Theobroma cacao
Thecc1EG031522 1.0kb upstream 1.0kb upstream 5613 true scaffold_7: 5341463-5347075 Theobroma cacao
Thecc1EG031522 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5341463-5342462 Theobroma cacao
Thecc1EG031522 1.0kb downstream 1.0kb downstream 5613 true scaffold_7: 5342463-5348075 Theobroma cacao
Thecc1EG031522 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5347076-5348075 Theobroma cacao
Thecc1EG031522 2.0kb upstream 2.0kb upstream 6613 true scaffold_7: 5340463-5347075 Theobroma cacao
Thecc1EG031522 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5340463-5342462 Theobroma cacao
Thecc1EG031522 2.0kb downstream 2.0kb downstream 6613 true scaffold_7: 5342463-5349075 Theobroma cacao
Thecc1EG031522 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5347076-5349075 Theobroma cacao
Thecc1EG031522 5.0kb upstream 5.0kb upstream 9613 true scaffold_7: 5337463-5347075 Theobroma cacao
Thecc1EG031522 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5337463-5342462 Theobroma cacao
Thecc1EG031522 5.0kb downstream 5.0kb downstream 9613 true scaffold_7: 5342463-5352075 Theobroma cacao
Thecc1EG031522 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5347076-5352075 Theobroma cacao
Thecc1EG031522 10.0kb upstream 10.0kb upstream 14613 true scaffold_7: 5332463-5347075 Theobroma cacao
Thecc1EG031522 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5332463-5342462 Theobroma cacao
Thecc1EG031522 10.0kb downstream 10.0kb downstream 14613 true scaffold_7: 5342463-5357075 Theobroma cacao
Thecc1EG031522 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5347076-5357075 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041163 5273 Angiosperm View MSA
123831109 5264 Brassicales-Malvales View MSA
124344806 5266 SBM View MSA
124254124 5268 Malvidae View MSA
124066860 5270 Rosid View MSA
123751088 5271 Pentapetalae View MSA
122789719 5272 Eudicot View MSA
121346685 5274 Embryophyte View MSA
123425095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain