Gene : Pavir.4KG253100 P. virgatum v4.1
Defline:  (1 of 2) PTHR11558//PTHR11558:SF29 - SPERMIDINE/SPERMINE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2282
Name:  ? Pavir.4KG253100 Secondary Identifier:  ? PAC:37606441
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum BSUBPOLYAMSYN-PWY Panicum virgatum pathologic  
Pvirgatum POLYAMINSYN3-PWY Panicum virgatum pathologic  
Pvirgatum PWY-7528 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4KG253100 0.5kb upstream 0.5kb upstream 5267 true Chr04K: 44084179-44089445 Panicum virgatum
Pavir.4KG253100 0.5kb upstream 0.5kb upstream 500 false Chr04K: 44088946-44089445 Panicum virgatum
Pavir.4KG253100 0.5kb downstream 0.5kb downstream 5267 true Chr04K: 44083679-44088945 Panicum virgatum
Pavir.4KG253100 0.5kb downstream 0.5kb downstream 500 false Chr04K: 44083679-44084178 Panicum virgatum
Pavir.4KG253100 1.0kb upstream 1.0kb upstream 5767 true Chr04K: 44084179-44089945 Panicum virgatum
Pavir.4KG253100 1.0kb upstream 1.0kb upstream 1000 false Chr04K: 44088946-44089945 Panicum virgatum
Pavir.4KG253100 1.0kb downstream 1.0kb downstream 5767 true Chr04K: 44083179-44088945 Panicum virgatum
Pavir.4KG253100 1.0kb downstream 1.0kb downstream 1000 false Chr04K: 44083179-44084178 Panicum virgatum
Pavir.4KG253100 2.0kb upstream 2.0kb upstream 6767 true Chr04K: 44084179-44090945 Panicum virgatum
Pavir.4KG253100 2.0kb upstream 2.0kb upstream 2000 false Chr04K: 44088946-44090945 Panicum virgatum
Pavir.4KG253100 2.0kb downstream 2.0kb downstream 6767 true Chr04K: 44082179-44088945 Panicum virgatum
Pavir.4KG253100 2.0kb downstream 2.0kb downstream 2000 false Chr04K: 44082179-44084178 Panicum virgatum
Pavir.4KG253100 5.0kb upstream 5.0kb upstream 9767 true Chr04K: 44084179-44093945 Panicum virgatum
Pavir.4KG253100 5.0kb upstream 5.0kb upstream 5000 false Chr04K: 44088946-44093945 Panicum virgatum
Pavir.4KG253100 5.0kb downstream 5.0kb downstream 9767 true Chr04K: 44079179-44088945 Panicum virgatum
Pavir.4KG253100 5.0kb downstream 5.0kb downstream 5000 false Chr04K: 44079179-44084178 Panicum virgatum
Pavir.4KG253100 10.0kb upstream 10.0kb upstream 14767 true Chr04K: 44084179-44098945 Panicum virgatum
Pavir.4KG253100 10.0kb upstream 10.0kb upstream 10000 false Chr04K: 44088946-44098945 Panicum virgatum
Pavir.4KG253100 10.0kb downstream 10.0kb downstream 14767 true Chr04K: 44074179-44088945 Panicum virgatum
Pavir.4KG253100 10.0kb downstream 10.0kb downstream 10000 false Chr04K: 44074179-44084178 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187553 5267 Panicoideae View MSA
124577208 5269 Grass View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain