Gene : Pavir.4KG227500 P. virgatum v4.1
Defline:  (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) Genomic Order:  1440
Name:  ? Pavir.4KG227500 Secondary Identifier:  ? PAC:37607804
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4KG227500 0.5kb upstream 0.5kb upstream 8731 true Chr04K: 19898312-19907042 Panicum virgatum
Pavir.4KG227500 0.5kb upstream 0.5kb upstream 500 false Chr04K: 19906543-19907042 Panicum virgatum
Pavir.4KG227500 0.5kb downstream 0.5kb downstream 8731 true Chr04K: 19897812-19906542 Panicum virgatum
Pavir.4KG227500 0.5kb downstream 0.5kb downstream 500 false Chr04K: 19897812-19898311 Panicum virgatum
Pavir.4KG227500 1.0kb upstream 1.0kb upstream 9231 true Chr04K: 19898312-19907542 Panicum virgatum
Pavir.4KG227500 1.0kb upstream 1.0kb upstream 1000 false Chr04K: 19906543-19907542 Panicum virgatum
Pavir.4KG227500 1.0kb downstream 1.0kb downstream 9231 true Chr04K: 19897312-19906542 Panicum virgatum
Pavir.4KG227500 1.0kb downstream 1.0kb downstream 1000 false Chr04K: 19897312-19898311 Panicum virgatum
Pavir.4KG227500 2.0kb upstream 2.0kb upstream 10231 true Chr04K: 19898312-19908542 Panicum virgatum
Pavir.4KG227500 2.0kb upstream 2.0kb upstream 2000 false Chr04K: 19906543-19908542 Panicum virgatum
Pavir.4KG227500 2.0kb downstream 2.0kb downstream 10231 true Chr04K: 19896312-19906542 Panicum virgatum
Pavir.4KG227500 2.0kb downstream 2.0kb downstream 2000 false Chr04K: 19896312-19898311 Panicum virgatum
Pavir.4KG227500 5.0kb upstream 5.0kb upstream 13231 true Chr04K: 19898312-19911542 Panicum virgatum
Pavir.4KG227500 5.0kb upstream 5.0kb upstream 5000 false Chr04K: 19906543-19911542 Panicum virgatum
Pavir.4KG227500 5.0kb downstream 5.0kb downstream 13231 true Chr04K: 19893312-19906542 Panicum virgatum
Pavir.4KG227500 5.0kb downstream 5.0kb downstream 5000 false Chr04K: 19893312-19898311 Panicum virgatum
Pavir.4KG227500 10.0kb upstream 10.0kb upstream 18231 true Chr04K: 19898312-19916542 Panicum virgatum
Pavir.4KG227500 10.0kb upstream 10.0kb upstream 10000 false Chr04K: 19906543-19916542 Panicum virgatum
Pavir.4KG227500 10.0kb downstream 10.0kb downstream 18231 true Chr04K: 19888312-19906542 Panicum virgatum
Pavir.4KG227500 10.0kb downstream 10.0kb downstream 10000 false Chr04K: 19888312-19898311 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176905 5267 Panicoideae View MSA
124580269 5269 Grass View MSA
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain