Gene : Pavir.4KG408500 P. virgatum v4.1
Defline:  (1 of 2) K00020 - 3-hydroxyisobutyrate dehydrogenase (E1.1.1.31, mmsB) Genomic Order:  3384
Name:  ? Pavir.4KG408500 Secondary Identifier:  ? PAC:37603255
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum VALDEG-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4KG408500 0.5kb upstream 0.5kb upstream 4285 true Chr04K: 59857559-59861843 Panicum virgatum
Pavir.4KG408500 0.5kb upstream 0.5kb upstream 500 false Chr04K: 59857559-59858058 Panicum virgatum
Pavir.4KG408500 0.5kb downstream 0.5kb downstream 4285 true Chr04K: 59858059-59862343 Panicum virgatum
Pavir.4KG408500 0.5kb downstream 0.5kb downstream 500 false Chr04K: 59861844-59862343 Panicum virgatum
Pavir.4KG408500 1.0kb upstream 1.0kb upstream 4785 true Chr04K: 59857059-59861843 Panicum virgatum
Pavir.4KG408500 1.0kb upstream 1.0kb upstream 1000 false Chr04K: 59857059-59858058 Panicum virgatum
Pavir.4KG408500 1.0kb downstream 1.0kb downstream 4785 true Chr04K: 59858059-59862843 Panicum virgatum
Pavir.4KG408500 1.0kb downstream 1.0kb downstream 1000 false Chr04K: 59861844-59862843 Panicum virgatum
Pavir.4KG408500 2.0kb upstream 2.0kb upstream 5785 true Chr04K: 59856059-59861843 Panicum virgatum
Pavir.4KG408500 2.0kb upstream 2.0kb upstream 2000 false Chr04K: 59856059-59858058 Panicum virgatum
Pavir.4KG408500 2.0kb downstream 2.0kb downstream 5785 true Chr04K: 59858059-59863843 Panicum virgatum
Pavir.4KG408500 2.0kb downstream 2.0kb downstream 2000 false Chr04K: 59861844-59863843 Panicum virgatum
Pavir.4KG408500 5.0kb upstream 5.0kb upstream 8785 true Chr04K: 59853059-59861843 Panicum virgatum
Pavir.4KG408500 5.0kb upstream 5.0kb upstream 5000 false Chr04K: 59853059-59858058 Panicum virgatum
Pavir.4KG408500 5.0kb downstream 5.0kb downstream 8785 true Chr04K: 59858059-59866843 Panicum virgatum
Pavir.4KG408500 5.0kb downstream 5.0kb downstream 5000 false Chr04K: 59861844-59866843 Panicum virgatum
Pavir.4KG408500 10.0kb upstream 10.0kb upstream 13785 true Chr04K: 59848059-59861843 Panicum virgatum
Pavir.4KG408500 10.0kb upstream 10.0kb upstream 10000 false Chr04K: 59848059-59858058 Panicum virgatum
Pavir.4KG408500 10.0kb downstream 10.0kb downstream 13785 true Chr04K: 59858059-59871843 Panicum virgatum
Pavir.4KG408500 10.0kb downstream 10.0kb downstream 10000 false Chr04K: 59861844-59871843 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176709 5267 Panicoideae View MSA
124570878 5269 Grass View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain