Gene : Pavir.4NG101300 P. virgatum v4.1
Defline:  (1 of 4) PTHR12526//PTHR12526:SF371 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1019
Name:  ? Pavir.4NG101300 Secondary Identifier:  ? PAC:37681073
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum GLYCOGENSYNTH-PWY Panicum virgatum pathologic  
Pvirgatum PWY-622 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG101300 0.5kb upstream 0.5kb upstream 6123 true Chr04N: 13616640-13622762 Panicum virgatum
Pavir.4NG101300 0.5kb upstream 0.5kb upstream 500 false Chr04N: 13622263-13622762 Panicum virgatum
Pavir.4NG101300 0.5kb downstream 0.5kb downstream 6123 true Chr04N: 13616140-13622262 Panicum virgatum
Pavir.4NG101300 0.5kb downstream 0.5kb downstream 500 false Chr04N: 13616140-13616639 Panicum virgatum
Pavir.4NG101300 1.0kb upstream 1.0kb upstream 6623 true Chr04N: 13616640-13623262 Panicum virgatum
Pavir.4NG101300 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 13622263-13623262 Panicum virgatum
Pavir.4NG101300 1.0kb downstream 1.0kb downstream 6623 true Chr04N: 13615640-13622262 Panicum virgatum
Pavir.4NG101300 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 13615640-13616639 Panicum virgatum
Pavir.4NG101300 2.0kb upstream 2.0kb upstream 7623 true Chr04N: 13616640-13624262 Panicum virgatum
Pavir.4NG101300 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 13622263-13624262 Panicum virgatum
Pavir.4NG101300 2.0kb downstream 2.0kb downstream 7623 true Chr04N: 13614640-13622262 Panicum virgatum
Pavir.4NG101300 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 13614640-13616639 Panicum virgatum
Pavir.4NG101300 5.0kb upstream 5.0kb upstream 10623 true Chr04N: 13616640-13627262 Panicum virgatum
Pavir.4NG101300 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 13622263-13627262 Panicum virgatum
Pavir.4NG101300 5.0kb downstream 5.0kb downstream 10623 true Chr04N: 13611640-13622262 Panicum virgatum
Pavir.4NG101300 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 13611640-13616639 Panicum virgatum
Pavir.4NG101300 10.0kb upstream 10.0kb upstream 15623 true Chr04N: 13616640-13632262 Panicum virgatum
Pavir.4NG101300 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 13622263-13632262 Panicum virgatum
Pavir.4NG101300 10.0kb downstream 10.0kb downstream 15623 true Chr04N: 13606640-13622262 Panicum virgatum
Pavir.4NG101300 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 13606640-13616639 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178854 5267 Panicoideae View MSA
124577600 5269 Grass View MSA
122042262 5273 Angiosperm View MSA
121347324 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain