Gene : Thecc1EG031770 T. cacao v1.1

Defline:  (1 of 2) PTHR31614:SF2 - F28N24.16 PROTEIN Genomic Order:  1017
Name:  ? Thecc1EG031770 Secondary Identifier:  ? PAC:27444167

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031770 0.5kb upstream 0.5kb upstream 1397 true scaffold_7: 6762266-6763662 Theobroma cacao
Thecc1EG031770 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6763163-6763662 Theobroma cacao
Thecc1EG031770 0.5kb downstream 0.5kb downstream 1397 true scaffold_7: 6761766-6763162 Theobroma cacao
Thecc1EG031770 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6761766-6762265 Theobroma cacao
Thecc1EG031770 1.0kb upstream 1.0kb upstream 1897 true scaffold_7: 6762266-6764162 Theobroma cacao
Thecc1EG031770 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6763163-6764162 Theobroma cacao
Thecc1EG031770 1.0kb downstream 1.0kb downstream 1897 true scaffold_7: 6761266-6763162 Theobroma cacao
Thecc1EG031770 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6761266-6762265 Theobroma cacao
Thecc1EG031770 2.0kb upstream 2.0kb upstream 2897 true scaffold_7: 6762266-6765162 Theobroma cacao
Thecc1EG031770 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6763163-6765162 Theobroma cacao
Thecc1EG031770 2.0kb downstream 2.0kb downstream 2897 true scaffold_7: 6760266-6763162 Theobroma cacao
Thecc1EG031770 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6760266-6762265 Theobroma cacao
Thecc1EG031770 5.0kb upstream 5.0kb upstream 5897 true scaffold_7: 6762266-6768162 Theobroma cacao
Thecc1EG031770 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6763163-6768162 Theobroma cacao
Thecc1EG031770 5.0kb downstream 5.0kb downstream 5897 true scaffold_7: 6757266-6763162 Theobroma cacao
Thecc1EG031770 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6757266-6762265 Theobroma cacao
Thecc1EG031770 10.0kb upstream 10.0kb upstream 10897 true scaffold_7: 6762266-6773162 Theobroma cacao
Thecc1EG031770 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6763163-6773162 Theobroma cacao
Thecc1EG031770 10.0kb downstream 10.0kb downstream 10897 true scaffold_7: 6752266-6763162 Theobroma cacao
Thecc1EG031770 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6752266-6762265 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840859 5264 Brassicales-Malvales View MSA
124344693 5266 SBM View MSA
124253074 5268 Malvidae View MSA
124069142 5270 Rosid View MSA
123747822 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain