Gene : Thecc1EG031772 T. cacao v1.1
Defline:  (1 of 1) K03846 - alpha-1,2-mannosyltransferase (ALG9) Genomic Order:  1018
Name:  ? Thecc1EG031772 Secondary Identifier:  ? PAC:27444405
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031772 0.5kb upstream 0.5kb upstream 9366 true scaffold_7: 6762697-6772062 Theobroma cacao
Thecc1EG031772 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6771563-6772062 Theobroma cacao
Thecc1EG031772 0.5kb downstream 0.5kb downstream 9366 true scaffold_7: 6762197-6771562 Theobroma cacao
Thecc1EG031772 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6762197-6762696 Theobroma cacao
Thecc1EG031772 1.0kb upstream 1.0kb upstream 9866 true scaffold_7: 6762697-6772562 Theobroma cacao
Thecc1EG031772 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6771563-6772562 Theobroma cacao
Thecc1EG031772 1.0kb downstream 1.0kb downstream 9866 true scaffold_7: 6761697-6771562 Theobroma cacao
Thecc1EG031772 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6761697-6762696 Theobroma cacao
Thecc1EG031772 2.0kb upstream 2.0kb upstream 10866 true scaffold_7: 6762697-6773562 Theobroma cacao
Thecc1EG031772 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6771563-6773562 Theobroma cacao
Thecc1EG031772 2.0kb downstream 2.0kb downstream 10866 true scaffold_7: 6760697-6771562 Theobroma cacao
Thecc1EG031772 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6760697-6762696 Theobroma cacao
Thecc1EG031772 5.0kb upstream 5.0kb upstream 13866 true scaffold_7: 6762697-6776562 Theobroma cacao
Thecc1EG031772 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6771563-6776562 Theobroma cacao
Thecc1EG031772 5.0kb downstream 5.0kb downstream 13866 true scaffold_7: 6757697-6771562 Theobroma cacao
Thecc1EG031772 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6757697-6762696 Theobroma cacao
Thecc1EG031772 10.0kb upstream 10.0kb upstream 18866 true scaffold_7: 6762697-6781562 Theobroma cacao
Thecc1EG031772 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6771563-6781562 Theobroma cacao
Thecc1EG031772 10.0kb downstream 10.0kb downstream 18866 true scaffold_7: 6752697-6771562 Theobroma cacao
Thecc1EG031772 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6752697-6762696 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830076 5264 Brassicales-Malvales View MSA
124338936 5266 SBM View MSA
124240717 5268 Malvidae View MSA
124063894 5270 Rosid View MSA
123739180 5271 Pentapetalae View MSA
122792899 5272 Eudicot View MSA
122047360 5273 Angiosperm View MSA
121346060 5274 Embryophyte View MSA
123423967 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain