Gene : Pavir.4NG036000 P. virgatum v4.1
Defline:  (1 of 1) K00800 - 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) Genomic Order:  327
Name:  ? Pavir.4NG036000 Secondary Identifier:  ? PAC:37683678
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG036000 0.5kb upstream 0.5kb upstream 3279 true Chr04N: 3827750-3831028 Panicum virgatum
Pavir.4NG036000 0.5kb upstream 0.5kb upstream 500 false Chr04N: 3827750-3828249 Panicum virgatum
Pavir.4NG036000 0.5kb downstream 0.5kb downstream 3279 true Chr04N: 3828250-3831528 Panicum virgatum
Pavir.4NG036000 0.5kb downstream 0.5kb downstream 500 false Chr04N: 3831029-3831528 Panicum virgatum
Pavir.4NG036000 1.0kb upstream 1.0kb upstream 3779 true Chr04N: 3827250-3831028 Panicum virgatum
Pavir.4NG036000 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 3827250-3828249 Panicum virgatum
Pavir.4NG036000 1.0kb downstream 1.0kb downstream 3779 true Chr04N: 3828250-3832028 Panicum virgatum
Pavir.4NG036000 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 3831029-3832028 Panicum virgatum
Pavir.4NG036000 2.0kb upstream 2.0kb upstream 4779 true Chr04N: 3826250-3831028 Panicum virgatum
Pavir.4NG036000 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 3826250-3828249 Panicum virgatum
Pavir.4NG036000 2.0kb downstream 2.0kb downstream 4779 true Chr04N: 3828250-3833028 Panicum virgatum
Pavir.4NG036000 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 3831029-3833028 Panicum virgatum
Pavir.4NG036000 5.0kb upstream 5.0kb upstream 7779 true Chr04N: 3823250-3831028 Panicum virgatum
Pavir.4NG036000 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 3823250-3828249 Panicum virgatum
Pavir.4NG036000 5.0kb downstream 5.0kb downstream 7779 true Chr04N: 3828250-3836028 Panicum virgatum
Pavir.4NG036000 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 3831029-3836028 Panicum virgatum
Pavir.4NG036000 10.0kb upstream 10.0kb upstream 12779 true Chr04N: 3818250-3831028 Panicum virgatum
Pavir.4NG036000 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 3818250-3828249 Panicum virgatum
Pavir.4NG036000 10.0kb downstream 10.0kb downstream 12779 true Chr04N: 3828250-3841028 Panicum virgatum
Pavir.4NG036000 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 3831029-3841028 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193223 5267 Panicoideae View MSA
124574120 5269 Grass View MSA
122041964 5273 Angiosperm View MSA
121345789 5274 Embryophyte View MSA
123424749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain