Gene : Pavir.4NG043200 P. virgatum v4.1
Defline:  (1 of 2) PTHR13697:SF7 - 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  394
Name:  ? Pavir.4NG043200 Secondary Identifier:  ? PAC:37680125
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ANAEROFRUCAT-PWY Panicum virgatum pathologic  
Pvirgatum ANAGLYCOLYSIS-PWY Panicum virgatum pathologic  
Pvirgatum PWY-1042 Panicum virgatum pathologic  
Pvirgatum PWY-5464 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG043200 0.5kb upstream 0.5kb upstream 6505 true Chr04N: 4469287-4475791 Panicum virgatum
Pavir.4NG043200 0.5kb upstream 0.5kb upstream 500 false Chr04N: 4475292-4475791 Panicum virgatum
Pavir.4NG043200 0.5kb downstream 0.5kb downstream 6505 true Chr04N: 4468787-4475291 Panicum virgatum
Pavir.4NG043200 0.5kb downstream 0.5kb downstream 500 false Chr04N: 4468787-4469286 Panicum virgatum
Pavir.4NG043200 1.0kb upstream 1.0kb upstream 7005 true Chr04N: 4469287-4476291 Panicum virgatum
Pavir.4NG043200 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 4475292-4476291 Panicum virgatum
Pavir.4NG043200 1.0kb downstream 1.0kb downstream 7005 true Chr04N: 4468287-4475291 Panicum virgatum
Pavir.4NG043200 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 4468287-4469286 Panicum virgatum
Pavir.4NG043200 2.0kb upstream 2.0kb upstream 8005 true Chr04N: 4469287-4477291 Panicum virgatum
Pavir.4NG043200 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 4475292-4477291 Panicum virgatum
Pavir.4NG043200 2.0kb downstream 2.0kb downstream 8005 true Chr04N: 4467287-4475291 Panicum virgatum
Pavir.4NG043200 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 4467287-4469286 Panicum virgatum
Pavir.4NG043200 5.0kb upstream 5.0kb upstream 11005 true Chr04N: 4469287-4480291 Panicum virgatum
Pavir.4NG043200 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 4475292-4480291 Panicum virgatum
Pavir.4NG043200 5.0kb downstream 5.0kb downstream 11005 true Chr04N: 4464287-4475291 Panicum virgatum
Pavir.4NG043200 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 4464287-4469286 Panicum virgatum
Pavir.4NG043200 10.0kb upstream 10.0kb upstream 16005 true Chr04N: 4469287-4485291 Panicum virgatum
Pavir.4NG043200 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 4475292-4485291 Panicum virgatum
Pavir.4NG043200 10.0kb downstream 10.0kb downstream 16005 true Chr04N: 4459287-4475291 Panicum virgatum
Pavir.4NG043200 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 4459287-4469286 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122187432 5267 Panicoideae View MSA
124574509 5269 Grass View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain