Gene : Thecc1EG032332 T. cacao v1.1
Defline:  (1 of 2) PTHR34777//PTHR34777:SF1 - FAMILY NOT NAMED // VQ MOTIF-CONTAINING PROTEIN Genomic Order:  1371
Name:  ? Thecc1EG032332 Secondary Identifier:  ? PAC:27445597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032332 0.5kb upstream 0.5kb upstream 1885 true scaffold_7: 10162333-10164217 Theobroma cacao
Thecc1EG032332 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10163718-10164217 Theobroma cacao
Thecc1EG032332 0.5kb downstream 0.5kb downstream 1885 true scaffold_7: 10161833-10163717 Theobroma cacao
Thecc1EG032332 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10161833-10162332 Theobroma cacao
Thecc1EG032332 1.0kb upstream 1.0kb upstream 2385 true scaffold_7: 10162333-10164717 Theobroma cacao
Thecc1EG032332 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10163718-10164717 Theobroma cacao
Thecc1EG032332 1.0kb downstream 1.0kb downstream 2385 true scaffold_7: 10161333-10163717 Theobroma cacao
Thecc1EG032332 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10161333-10162332 Theobroma cacao
Thecc1EG032332 2.0kb upstream 2.0kb upstream 3385 true scaffold_7: 10162333-10165717 Theobroma cacao
Thecc1EG032332 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10163718-10165717 Theobroma cacao
Thecc1EG032332 2.0kb downstream 2.0kb downstream 3385 true scaffold_7: 10160333-10163717 Theobroma cacao
Thecc1EG032332 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10160333-10162332 Theobroma cacao
Thecc1EG032332 5.0kb upstream 5.0kb upstream 6385 true scaffold_7: 10162333-10168717 Theobroma cacao
Thecc1EG032332 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10163718-10168717 Theobroma cacao
Thecc1EG032332 5.0kb downstream 5.0kb downstream 6385 true scaffold_7: 10157333-10163717 Theobroma cacao
Thecc1EG032332 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10157333-10162332 Theobroma cacao
Thecc1EG032332 10.0kb upstream 10.0kb upstream 11385 true scaffold_7: 10162333-10173717 Theobroma cacao
Thecc1EG032332 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10163718-10173717 Theobroma cacao
Thecc1EG032332 10.0kb downstream 10.0kb downstream 11385 true scaffold_7: 10152333-10163717 Theobroma cacao
Thecc1EG032332 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10152333-10162332 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
123840624 5264 Brassicales-Malvales View MSA
124342218 5266 SBM View MSA
124240018 5268 Malvidae View MSA
124050155 5270 Rosid View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain