Gene : Thecc1EG032315 T. cacao v1.1
Defline:  (1 of 3) PF07985 - SRR1 (SRR1) Genomic Order:  1357
Name:  ? Thecc1EG032315 Secondary Identifier:  ? PAC:27446397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032315 0.5kb upstream 0.5kb upstream 4230 true scaffold_7: 10051490-10055719 Theobroma cacao
Thecc1EG032315 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10051490-10051989 Theobroma cacao
Thecc1EG032315 0.5kb downstream 0.5kb downstream 4230 true scaffold_7: 10051990-10056219 Theobroma cacao
Thecc1EG032315 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10055720-10056219 Theobroma cacao
Thecc1EG032315 1.0kb upstream 1.0kb upstream 4730 true scaffold_7: 10050990-10055719 Theobroma cacao
Thecc1EG032315 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10050990-10051989 Theobroma cacao
Thecc1EG032315 1.0kb downstream 1.0kb downstream 4730 true scaffold_7: 10051990-10056719 Theobroma cacao
Thecc1EG032315 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10055720-10056719 Theobroma cacao
Thecc1EG032315 2.0kb upstream 2.0kb upstream 5730 true scaffold_7: 10049990-10055719 Theobroma cacao
Thecc1EG032315 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10049990-10051989 Theobroma cacao
Thecc1EG032315 2.0kb downstream 2.0kb downstream 5730 true scaffold_7: 10051990-10057719 Theobroma cacao
Thecc1EG032315 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10055720-10057719 Theobroma cacao
Thecc1EG032315 5.0kb upstream 5.0kb upstream 8730 true scaffold_7: 10046990-10055719 Theobroma cacao
Thecc1EG032315 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10046990-10051989 Theobroma cacao
Thecc1EG032315 5.0kb downstream 5.0kb downstream 8730 true scaffold_7: 10051990-10060719 Theobroma cacao
Thecc1EG032315 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10055720-10060719 Theobroma cacao
Thecc1EG032315 10.0kb upstream 10.0kb upstream 13730 true scaffold_7: 10041990-10055719 Theobroma cacao
Thecc1EG032315 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10041990-10051989 Theobroma cacao
Thecc1EG032315 10.0kb downstream 10.0kb downstream 13730 true scaffold_7: 10051990-10065719 Theobroma cacao
Thecc1EG032315 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10055720-10065719 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781984 5273 Angiosperm View MSA
123823797 5264 Brassicales-Malvales View MSA
124319853 5266 SBM View MSA
124168356 5268 Malvidae View MSA
123891761 5270 Rosid View MSA
123751503 5271 Pentapetalae View MSA
122774048 5272 Eudicot View MSA
121053531 5274 Embryophyte View MSA
123093549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain