Gene : Pavir.4NG147800 P. virgatum v4.1
Defline:  (1 of 2) K12479 - vacuolar protein sorting-associated protein 45 (VPS45) Genomic Order:  1400
Name:  ? Pavir.4NG147800 Secondary Identifier:  ? PAC:37679561
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG147800 0.5kb upstream 0.5kb upstream 7239 true Chr04N: 26679064-26686302 Panicum virgatum
Pavir.4NG147800 0.5kb upstream 0.5kb upstream 500 false Chr04N: 26685803-26686302 Panicum virgatum
Pavir.4NG147800 0.5kb downstream 0.5kb downstream 7239 true Chr04N: 26678564-26685802 Panicum virgatum
Pavir.4NG147800 0.5kb downstream 0.5kb downstream 500 false Chr04N: 26678564-26679063 Panicum virgatum
Pavir.4NG147800 1.0kb upstream 1.0kb upstream 7739 true Chr04N: 26679064-26686802 Panicum virgatum
Pavir.4NG147800 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 26685803-26686802 Panicum virgatum
Pavir.4NG147800 1.0kb downstream 1.0kb downstream 7739 true Chr04N: 26678064-26685802 Panicum virgatum
Pavir.4NG147800 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 26678064-26679063 Panicum virgatum
Pavir.4NG147800 2.0kb upstream 2.0kb upstream 8739 true Chr04N: 26679064-26687802 Panicum virgatum
Pavir.4NG147800 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 26685803-26687802 Panicum virgatum
Pavir.4NG147800 2.0kb downstream 2.0kb downstream 8739 true Chr04N: 26677064-26685802 Panicum virgatum
Pavir.4NG147800 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 26677064-26679063 Panicum virgatum
Pavir.4NG147800 5.0kb upstream 5.0kb upstream 11739 true Chr04N: 26679064-26690802 Panicum virgatum
Pavir.4NG147800 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 26685803-26690802 Panicum virgatum
Pavir.4NG147800 5.0kb downstream 5.0kb downstream 11739 true Chr04N: 26674064-26685802 Panicum virgatum
Pavir.4NG147800 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 26674064-26679063 Panicum virgatum
Pavir.4NG147800 10.0kb upstream 10.0kb upstream 16739 true Chr04N: 26679064-26695802 Panicum virgatum
Pavir.4NG147800 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 26685803-26695802 Panicum virgatum
Pavir.4NG147800 10.0kb downstream 10.0kb downstream 16739 true Chr04N: 26669064-26685802 Panicum virgatum
Pavir.4NG147800 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 26669064-26679063 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186231 5267 Panicoideae View MSA
124576173 5269 Grass View MSA
122044775 5273 Angiosperm View MSA
121347331 5274 Embryophyte View MSA
123424934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain