Gene : Thecc1EG032253 T. cacao v1.1

Defline:  (1 of 13) PF00646//PF08387 - F-box domain (F-box) // FBD (FBD) Genomic Order:  1318
Name:  ? Thecc1EG032253 Secondary Identifier:  ? PAC:27444571

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032253 0.5kb upstream 0.5kb upstream 5461 true scaffold_7: 9656542-9662002 Theobroma cacao
Thecc1EG032253 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9661503-9662002 Theobroma cacao
Thecc1EG032253 0.5kb downstream 0.5kb downstream 5461 true scaffold_7: 9656042-9661502 Theobroma cacao
Thecc1EG032253 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9656042-9656541 Theobroma cacao
Thecc1EG032253 1.0kb upstream 1.0kb upstream 5961 true scaffold_7: 9656542-9662502 Theobroma cacao
Thecc1EG032253 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9661503-9662502 Theobroma cacao
Thecc1EG032253 1.0kb downstream 1.0kb downstream 5961 true scaffold_7: 9655542-9661502 Theobroma cacao
Thecc1EG032253 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9655542-9656541 Theobroma cacao
Thecc1EG032253 2.0kb upstream 2.0kb upstream 6961 true scaffold_7: 9656542-9663502 Theobroma cacao
Thecc1EG032253 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9661503-9663502 Theobroma cacao
Thecc1EG032253 2.0kb downstream 2.0kb downstream 6961 true scaffold_7: 9654542-9661502 Theobroma cacao
Thecc1EG032253 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9654542-9656541 Theobroma cacao
Thecc1EG032253 5.0kb upstream 5.0kb upstream 9961 true scaffold_7: 9656542-9666502 Theobroma cacao
Thecc1EG032253 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9661503-9666502 Theobroma cacao
Thecc1EG032253 5.0kb downstream 5.0kb downstream 9961 true scaffold_7: 9651542-9661502 Theobroma cacao
Thecc1EG032253 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9651542-9656541 Theobroma cacao
Thecc1EG032253 10.0kb upstream 10.0kb upstream 14961 true scaffold_7: 9656542-9671502 Theobroma cacao
Thecc1EG032253 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9661503-9671502 Theobroma cacao
Thecc1EG032253 10.0kb downstream 10.0kb downstream 14961 true scaffold_7: 9646542-9661502 Theobroma cacao
Thecc1EG032253 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9646542-9656541 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837353 5264 Brassicales-Malvales View MSA
124322292 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain