Gene : Thecc1EG032237 T. cacao v1.1
Defline:  (1 of 1) 2.5.1.90 - All-trans-octaprenyl-diphosphate synthase / Trans-prenyltransferase Genomic Order:  1307
Name:  ? Thecc1EG032237 Secondary Identifier:  ? PAC:27446281
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao HEXPPSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-5120 Theobroma cacao pathologic  
Tcacao PWY-5783 Theobroma cacao pathologic  
Tcacao PWY-5805 Theobroma cacao pathologic  
Tcacao PWY-5807 Theobroma cacao pathologic  
Tcacao PWY-5864 Theobroma cacao pathologic  
Tcacao PWY-5910 Theobroma cacao pathologic  
Tcacao PWY-6520 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032237 0.5kb upstream 0.5kb upstream 6341 true scaffold_7: 9542955-9549295 Theobroma cacao
Thecc1EG032237 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9542955-9543454 Theobroma cacao
Thecc1EG032237 0.5kb downstream 0.5kb downstream 6341 true scaffold_7: 9543455-9549795 Theobroma cacao
Thecc1EG032237 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9549296-9549795 Theobroma cacao
Thecc1EG032237 1.0kb upstream 1.0kb upstream 6841 true scaffold_7: 9542455-9549295 Theobroma cacao
Thecc1EG032237 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9542455-9543454 Theobroma cacao
Thecc1EG032237 1.0kb downstream 1.0kb downstream 6841 true scaffold_7: 9543455-9550295 Theobroma cacao
Thecc1EG032237 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9549296-9550295 Theobroma cacao
Thecc1EG032237 2.0kb upstream 2.0kb upstream 7841 true scaffold_7: 9541455-9549295 Theobroma cacao
Thecc1EG032237 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9541455-9543454 Theobroma cacao
Thecc1EG032237 2.0kb downstream 2.0kb downstream 7841 true scaffold_7: 9543455-9551295 Theobroma cacao
Thecc1EG032237 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9549296-9551295 Theobroma cacao
Thecc1EG032237 5.0kb upstream 5.0kb upstream 10841 true scaffold_7: 9538455-9549295 Theobroma cacao
Thecc1EG032237 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9538455-9543454 Theobroma cacao
Thecc1EG032237 5.0kb downstream 5.0kb downstream 10841 true scaffold_7: 9543455-9554295 Theobroma cacao
Thecc1EG032237 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9549296-9554295 Theobroma cacao
Thecc1EG032237 10.0kb upstream 10.0kb upstream 15841 true scaffold_7: 9533455-9549295 Theobroma cacao
Thecc1EG032237 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9533455-9543454 Theobroma cacao
Thecc1EG032237 10.0kb downstream 10.0kb downstream 15841 true scaffold_7: 9543455-9559295 Theobroma cacao
Thecc1EG032237 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9549296-9559295 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
123836843 5264 Brassicales-Malvales View MSA
124340662 5266 SBM View MSA
124241252 5268 Malvidae View MSA
124065347 5270 Rosid View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain