Gene : Thecc1EG032188 T. cacao v1.1
Defline:  (1 of 3) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  1286
Name:  ? Thecc1EG032188 Secondary Identifier:  ? PAC:27445746
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032188 0.5kb upstream 0.5kb upstream 4180 true scaffold_7: 9382485-9386664 Theobroma cacao
Thecc1EG032188 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9382485-9382984 Theobroma cacao
Thecc1EG032188 0.5kb downstream 0.5kb downstream 4180 true scaffold_7: 9382985-9387164 Theobroma cacao
Thecc1EG032188 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9386665-9387164 Theobroma cacao
Thecc1EG032188 1.0kb upstream 1.0kb upstream 4680 true scaffold_7: 9381985-9386664 Theobroma cacao
Thecc1EG032188 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9381985-9382984 Theobroma cacao
Thecc1EG032188 1.0kb downstream 1.0kb downstream 4680 true scaffold_7: 9382985-9387664 Theobroma cacao
Thecc1EG032188 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9386665-9387664 Theobroma cacao
Thecc1EG032188 2.0kb upstream 2.0kb upstream 5680 true scaffold_7: 9380985-9386664 Theobroma cacao
Thecc1EG032188 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9380985-9382984 Theobroma cacao
Thecc1EG032188 2.0kb downstream 2.0kb downstream 5680 true scaffold_7: 9382985-9388664 Theobroma cacao
Thecc1EG032188 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9386665-9388664 Theobroma cacao
Thecc1EG032188 5.0kb upstream 5.0kb upstream 8680 true scaffold_7: 9377985-9386664 Theobroma cacao
Thecc1EG032188 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9377985-9382984 Theobroma cacao
Thecc1EG032188 5.0kb downstream 5.0kb downstream 8680 true scaffold_7: 9382985-9391664 Theobroma cacao
Thecc1EG032188 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9386665-9391664 Theobroma cacao
Thecc1EG032188 10.0kb upstream 10.0kb upstream 13680 true scaffold_7: 9372985-9386664 Theobroma cacao
Thecc1EG032188 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9372985-9382984 Theobroma cacao
Thecc1EG032188 10.0kb downstream 10.0kb downstream 13680 true scaffold_7: 9382985-9396664 Theobroma cacao
Thecc1EG032188 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9386665-9396664 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834900 5264 Brassicales-Malvales View MSA
124341453 5266 SBM View MSA
124247817 5268 Malvidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain