Gene : Pavir.4NG268700 P. virgatum v4.1
Defline:  (1 of 5) K00058 - D-3-phosphoglycerate dehydrogenase (serA, PHGDH) Genomic Order:  2403
Name:  ? Pavir.4NG268700 Secondary Identifier:  ? PAC:37682104
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum SER-GLYSYN-PWY Panicum virgatum pathologic  
Pvirgatum SERSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG268700 0.5kb upstream 0.5kb upstream 4707 true Chr04N: 47661387-47666093 Panicum virgatum
Pavir.4NG268700 0.5kb upstream 0.5kb upstream 500 false Chr04N: 47665594-47666093 Panicum virgatum
Pavir.4NG268700 0.5kb downstream 0.5kb downstream 4707 true Chr04N: 47660887-47665593 Panicum virgatum
Pavir.4NG268700 0.5kb downstream 0.5kb downstream 500 false Chr04N: 47660887-47661386 Panicum virgatum
Pavir.4NG268700 1.0kb upstream 1.0kb upstream 5207 true Chr04N: 47661387-47666593 Panicum virgatum
Pavir.4NG268700 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 47665594-47666593 Panicum virgatum
Pavir.4NG268700 1.0kb downstream 1.0kb downstream 5207 true Chr04N: 47660387-47665593 Panicum virgatum
Pavir.4NG268700 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 47660387-47661386 Panicum virgatum
Pavir.4NG268700 2.0kb upstream 2.0kb upstream 6207 true Chr04N: 47661387-47667593 Panicum virgatum
Pavir.4NG268700 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 47665594-47667593 Panicum virgatum
Pavir.4NG268700 2.0kb downstream 2.0kb downstream 6207 true Chr04N: 47659387-47665593 Panicum virgatum
Pavir.4NG268700 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 47659387-47661386 Panicum virgatum
Pavir.4NG268700 5.0kb upstream 5.0kb upstream 9207 true Chr04N: 47661387-47670593 Panicum virgatum
Pavir.4NG268700 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 47665594-47670593 Panicum virgatum
Pavir.4NG268700 5.0kb downstream 5.0kb downstream 9207 true Chr04N: 47656387-47665593 Panicum virgatum
Pavir.4NG268700 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 47656387-47661386 Panicum virgatum
Pavir.4NG268700 10.0kb upstream 10.0kb upstream 14207 true Chr04N: 47661387-47675593 Panicum virgatum
Pavir.4NG268700 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 47665594-47675593 Panicum virgatum
Pavir.4NG268700 10.0kb downstream 10.0kb downstream 14207 true Chr04N: 47651387-47665593 Panicum virgatum
Pavir.4NG268700 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 47651387-47661386 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177828 5267 Panicoideae View MSA
124573824 5269 Grass View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain