Gene : Pavir.4NG249900 P. virgatum v4.1
Defline:  (1 of 3) K01870 - isoleucyl-tRNA synthetase (IARS, ileS) Genomic Order:  2239
Name:  ? Pavir.4NG249900 Secondary Identifier:  ? PAC:37681045
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG249900 0.5kb upstream 0.5kb upstream 12833 true Chr04N: 45810642-45823474 Panicum virgatum
Pavir.4NG249900 0.5kb upstream 0.5kb upstream 500 false Chr04N: 45810642-45811141 Panicum virgatum
Pavir.4NG249900 0.5kb downstream 0.5kb downstream 12833 true Chr04N: 45811142-45823974 Panicum virgatum
Pavir.4NG249900 0.5kb downstream 0.5kb downstream 500 false Chr04N: 45823475-45823974 Panicum virgatum
Pavir.4NG249900 1.0kb upstream 1.0kb upstream 13333 true Chr04N: 45810142-45823474 Panicum virgatum
Pavir.4NG249900 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 45810142-45811141 Panicum virgatum
Pavir.4NG249900 1.0kb downstream 1.0kb downstream 13333 true Chr04N: 45811142-45824474 Panicum virgatum
Pavir.4NG249900 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 45823475-45824474 Panicum virgatum
Pavir.4NG249900 2.0kb upstream 2.0kb upstream 14333 true Chr04N: 45809142-45823474 Panicum virgatum
Pavir.4NG249900 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 45809142-45811141 Panicum virgatum
Pavir.4NG249900 2.0kb downstream 2.0kb downstream 14333 true Chr04N: 45811142-45825474 Panicum virgatum
Pavir.4NG249900 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 45823475-45825474 Panicum virgatum
Pavir.4NG249900 5.0kb upstream 5.0kb upstream 17333 true Chr04N: 45806142-45823474 Panicum virgatum
Pavir.4NG249900 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 45806142-45811141 Panicum virgatum
Pavir.4NG249900 5.0kb downstream 5.0kb downstream 17333 true Chr04N: 45811142-45828474 Panicum virgatum
Pavir.4NG249900 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 45823475-45828474 Panicum virgatum
Pavir.4NG249900 10.0kb upstream 10.0kb upstream 22333 true Chr04N: 45801142-45823474 Panicum virgatum
Pavir.4NG249900 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 45801142-45811141 Panicum virgatum
Pavir.4NG249900 10.0kb downstream 10.0kb downstream 22333 true Chr04N: 45811142-45833474 Panicum virgatum
Pavir.4NG249900 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 45823475-45833474 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122191010 5267 Panicoideae View MSA
124571165 5269 Grass View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain