Gene : Pavir.4NG247600 P. virgatum v4.1
Defline:  (1 of 2) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  2218
Name:  ? Pavir.4NG247600 Secondary Identifier:  ? PAC:37679162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG247600 0.5kb upstream 0.5kb upstream 3254 true Chr04N: 45627461-45630714 Panicum virgatum
Pavir.4NG247600 0.5kb upstream 0.5kb upstream 500 false Chr04N: 45627461-45627960 Panicum virgatum
Pavir.4NG247600 0.5kb downstream 0.5kb downstream 3254 true Chr04N: 45627961-45631214 Panicum virgatum
Pavir.4NG247600 0.5kb downstream 0.5kb downstream 500 false Chr04N: 45630715-45631214 Panicum virgatum
Pavir.4NG247600 1.0kb upstream 1.0kb upstream 3754 true Chr04N: 45626961-45630714 Panicum virgatum
Pavir.4NG247600 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 45626961-45627960 Panicum virgatum
Pavir.4NG247600 1.0kb downstream 1.0kb downstream 3754 true Chr04N: 45627961-45631714 Panicum virgatum
Pavir.4NG247600 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 45630715-45631714 Panicum virgatum
Pavir.4NG247600 2.0kb upstream 2.0kb upstream 4754 true Chr04N: 45625961-45630714 Panicum virgatum
Pavir.4NG247600 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 45625961-45627960 Panicum virgatum
Pavir.4NG247600 2.0kb downstream 2.0kb downstream 4754 true Chr04N: 45627961-45632714 Panicum virgatum
Pavir.4NG247600 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 45630715-45632714 Panicum virgatum
Pavir.4NG247600 5.0kb upstream 5.0kb upstream 7754 true Chr04N: 45622961-45630714 Panicum virgatum
Pavir.4NG247600 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 45622961-45627960 Panicum virgatum
Pavir.4NG247600 5.0kb downstream 5.0kb downstream 7754 true Chr04N: 45627961-45635714 Panicum virgatum
Pavir.4NG247600 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 45630715-45635714 Panicum virgatum
Pavir.4NG247600 10.0kb upstream 10.0kb upstream 12754 true Chr04N: 45617961-45630714 Panicum virgatum
Pavir.4NG247600 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 45617961-45627960 Panicum virgatum
Pavir.4NG247600 10.0kb downstream 10.0kb downstream 12754 true Chr04N: 45627961-45640714 Panicum virgatum
Pavir.4NG247600 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 45630715-45640714 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178383 5267 Panicoideae View MSA
124580492 5269 Grass View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain