Gene : Thecc1EG032110 T. cacao v1.1
Defline:  (1 of 3) PTHR31618//PTHR31618:SF1 - FAMILY NOT NAMED // MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  1234
Name:  ? Thecc1EG032110 Secondary Identifier:  ? PAC:27445245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032110 0.5kb upstream 0.5kb upstream 6502 true scaffold_7: 8958641-8965142 Theobroma cacao
Thecc1EG032110 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8958641-8959140 Theobroma cacao
Thecc1EG032110 0.5kb downstream 0.5kb downstream 6502 true scaffold_7: 8959141-8965642 Theobroma cacao
Thecc1EG032110 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8965143-8965642 Theobroma cacao
Thecc1EG032110 1.0kb upstream 1.0kb upstream 7002 true scaffold_7: 8958141-8965142 Theobroma cacao
Thecc1EG032110 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8958141-8959140 Theobroma cacao
Thecc1EG032110 1.0kb downstream 1.0kb downstream 7002 true scaffold_7: 8959141-8966142 Theobroma cacao
Thecc1EG032110 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8965143-8966142 Theobroma cacao
Thecc1EG032110 2.0kb upstream 2.0kb upstream 8002 true scaffold_7: 8957141-8965142 Theobroma cacao
Thecc1EG032110 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8957141-8959140 Theobroma cacao
Thecc1EG032110 2.0kb downstream 2.0kb downstream 8002 true scaffold_7: 8959141-8967142 Theobroma cacao
Thecc1EG032110 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8965143-8967142 Theobroma cacao
Thecc1EG032110 5.0kb upstream 5.0kb upstream 11002 true scaffold_7: 8954141-8965142 Theobroma cacao
Thecc1EG032110 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8954141-8959140 Theobroma cacao
Thecc1EG032110 5.0kb downstream 5.0kb downstream 11002 true scaffold_7: 8959141-8970142 Theobroma cacao
Thecc1EG032110 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8965143-8970142 Theobroma cacao
Thecc1EG032110 10.0kb upstream 10.0kb upstream 16002 true scaffold_7: 8949141-8965142 Theobroma cacao
Thecc1EG032110 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8949141-8959140 Theobroma cacao
Thecc1EG032110 10.0kb downstream 10.0kb downstream 16002 true scaffold_7: 8959141-8975142 Theobroma cacao
Thecc1EG032110 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8965143-8975142 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833519 5264 Brassicales-Malvales View MSA
124350910 5266 SBM View MSA
124253835 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain