Gene : Pavir.4NG327400 P. virgatum v4.1
Defline:  (1 of 2) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Genomic Order:  2948
Name:  ? Pavir.4NG327400 Secondary Identifier:  ? PAC:37682214
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG327400 0.5kb upstream 0.5kb upstream 4522 true Chr04N: 54532934-54537455 Panicum virgatum
Pavir.4NG327400 0.5kb upstream 0.5kb upstream 500 false Chr04N: 54536956-54537455 Panicum virgatum
Pavir.4NG327400 0.5kb downstream 0.5kb downstream 4522 true Chr04N: 54532434-54536955 Panicum virgatum
Pavir.4NG327400 0.5kb downstream 0.5kb downstream 500 false Chr04N: 54532434-54532933 Panicum virgatum
Pavir.4NG327400 1.0kb upstream 1.0kb upstream 5022 true Chr04N: 54532934-54537955 Panicum virgatum
Pavir.4NG327400 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 54536956-54537955 Panicum virgatum
Pavir.4NG327400 1.0kb downstream 1.0kb downstream 5022 true Chr04N: 54531934-54536955 Panicum virgatum
Pavir.4NG327400 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 54531934-54532933 Panicum virgatum
Pavir.4NG327400 2.0kb upstream 2.0kb upstream 6022 true Chr04N: 54532934-54538955 Panicum virgatum
Pavir.4NG327400 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 54536956-54538955 Panicum virgatum
Pavir.4NG327400 2.0kb downstream 2.0kb downstream 6022 true Chr04N: 54530934-54536955 Panicum virgatum
Pavir.4NG327400 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 54530934-54532933 Panicum virgatum
Pavir.4NG327400 5.0kb upstream 5.0kb upstream 9022 true Chr04N: 54532934-54541955 Panicum virgatum
Pavir.4NG327400 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 54536956-54541955 Panicum virgatum
Pavir.4NG327400 5.0kb downstream 5.0kb downstream 9022 true Chr04N: 54527934-54536955 Panicum virgatum
Pavir.4NG327400 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 54527934-54532933 Panicum virgatum
Pavir.4NG327400 10.0kb upstream 10.0kb upstream 14022 true Chr04N: 54532934-54546955 Panicum virgatum
Pavir.4NG327400 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 54536956-54546955 Panicum virgatum
Pavir.4NG327400 10.0kb downstream 10.0kb downstream 14022 true Chr04N: 54522934-54536955 Panicum virgatum
Pavir.4NG327400 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 54522934-54532933 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181937 5267 Panicoideae View MSA
124572394 5269 Grass View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain