Gene : Pavir.4NG321500 P. virgatum v4.1
Defline:  (1 of 2) K12868 - pre-mRNA-splicing factor SYF2 (SYF2) Genomic Order:  2894
Name:  ? Pavir.4NG321500 Secondary Identifier:  ? PAC:37682647
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.4NG321500 0.5kb upstream 0.5kb upstream 3251 true Chr04N: 54185588-54188838 Panicum virgatum
Pavir.4NG321500 0.5kb upstream 0.5kb upstream 500 false Chr04N: 54185588-54186087 Panicum virgatum
Pavir.4NG321500 0.5kb downstream 0.5kb downstream 3251 true Chr04N: 54186088-54189338 Panicum virgatum
Pavir.4NG321500 0.5kb downstream 0.5kb downstream 500 false Chr04N: 54188839-54189338 Panicum virgatum
Pavir.4NG321500 1.0kb upstream 1.0kb upstream 3751 true Chr04N: 54185088-54188838 Panicum virgatum
Pavir.4NG321500 1.0kb upstream 1.0kb upstream 1000 false Chr04N: 54185088-54186087 Panicum virgatum
Pavir.4NG321500 1.0kb downstream 1.0kb downstream 3751 true Chr04N: 54186088-54189838 Panicum virgatum
Pavir.4NG321500 1.0kb downstream 1.0kb downstream 1000 false Chr04N: 54188839-54189838 Panicum virgatum
Pavir.4NG321500 2.0kb upstream 2.0kb upstream 4751 true Chr04N: 54184088-54188838 Panicum virgatum
Pavir.4NG321500 2.0kb upstream 2.0kb upstream 2000 false Chr04N: 54184088-54186087 Panicum virgatum
Pavir.4NG321500 2.0kb downstream 2.0kb downstream 4751 true Chr04N: 54186088-54190838 Panicum virgatum
Pavir.4NG321500 2.0kb downstream 2.0kb downstream 2000 false Chr04N: 54188839-54190838 Panicum virgatum
Pavir.4NG321500 5.0kb upstream 5.0kb upstream 7751 true Chr04N: 54181088-54188838 Panicum virgatum
Pavir.4NG321500 5.0kb upstream 5.0kb upstream 5000 false Chr04N: 54181088-54186087 Panicum virgatum
Pavir.4NG321500 5.0kb downstream 5.0kb downstream 7751 true Chr04N: 54186088-54193838 Panicum virgatum
Pavir.4NG321500 5.0kb downstream 5.0kb downstream 5000 false Chr04N: 54188839-54193838 Panicum virgatum
Pavir.4NG321500 10.0kb upstream 10.0kb upstream 12751 true Chr04N: 54176088-54188838 Panicum virgatum
Pavir.4NG321500 10.0kb upstream 10.0kb upstream 10000 false Chr04N: 54176088-54186087 Panicum virgatum
Pavir.4NG321500 10.0kb downstream 10.0kb downstream 12751 true Chr04N: 54186088-54198838 Panicum virgatum
Pavir.4NG321500 10.0kb downstream 10.0kb downstream 10000 false Chr04N: 54188839-54198838 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122107955 5267 Panicoideae Singleton cluster - no MSA
124583145 5269 Grass View MSA
122049804 5273 Angiosperm View MSA
121347073 5274 Embryophyte View MSA
123424870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain