Gene : Thecc1EG032080 T. cacao v1.1
Defline:  (1 of 1) PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Genomic Order:  1211
Name:  ? Thecc1EG032080 Secondary Identifier:  ? PAC:27444249
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032080 0.5kb upstream 0.5kb upstream 4614 true scaffold_7: 8722697-8727310 Theobroma cacao
Thecc1EG032080 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8726811-8727310 Theobroma cacao
Thecc1EG032080 0.5kb downstream 0.5kb downstream 4614 true scaffold_7: 8722197-8726810 Theobroma cacao
Thecc1EG032080 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8722197-8722696 Theobroma cacao
Thecc1EG032080 1.0kb upstream 1.0kb upstream 5114 true scaffold_7: 8722697-8727810 Theobroma cacao
Thecc1EG032080 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8726811-8727810 Theobroma cacao
Thecc1EG032080 1.0kb downstream 1.0kb downstream 5114 true scaffold_7: 8721697-8726810 Theobroma cacao
Thecc1EG032080 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8721697-8722696 Theobroma cacao
Thecc1EG032080 2.0kb upstream 2.0kb upstream 6114 true scaffold_7: 8722697-8728810 Theobroma cacao
Thecc1EG032080 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8726811-8728810 Theobroma cacao
Thecc1EG032080 2.0kb downstream 2.0kb downstream 6114 true scaffold_7: 8720697-8726810 Theobroma cacao
Thecc1EG032080 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8720697-8722696 Theobroma cacao
Thecc1EG032080 5.0kb upstream 5.0kb upstream 9114 true scaffold_7: 8722697-8731810 Theobroma cacao
Thecc1EG032080 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8726811-8731810 Theobroma cacao
Thecc1EG032080 5.0kb downstream 5.0kb downstream 9114 true scaffold_7: 8717697-8726810 Theobroma cacao
Thecc1EG032080 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8717697-8722696 Theobroma cacao
Thecc1EG032080 10.0kb upstream 10.0kb upstream 14114 true scaffold_7: 8722697-8736810 Theobroma cacao
Thecc1EG032080 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8726811-8736810 Theobroma cacao
Thecc1EG032080 10.0kb downstream 10.0kb downstream 14114 true scaffold_7: 8712697-8726810 Theobroma cacao
Thecc1EG032080 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8712697-8722696 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841023 5264 Brassicales-Malvales View MSA
124340887 5266 SBM View MSA
124242655 5268 Malvidae View MSA
124064929 5270 Rosid View MSA
123742775 5271 Pentapetalae View MSA
122786889 5272 Eudicot View MSA
122046180 5273 Angiosperm View MSA
121346558 5274 Embryophyte View MSA
123428776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain