Gene : Thecc1EG032700 T. cacao v1.1
Defline:  (1 of 61) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1556
Name:  ? Thecc1EG032700 Secondary Identifier:  ? PAC:27444937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032700 0.5kb upstream 0.5kb upstream 3897 true scaffold_7: 13621895-13625791 Theobroma cacao
Thecc1EG032700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13621895-13622394 Theobroma cacao
Thecc1EG032700 0.5kb downstream 0.5kb downstream 3897 true scaffold_7: 13622395-13626291 Theobroma cacao
Thecc1EG032700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13625792-13626291 Theobroma cacao
Thecc1EG032700 1.0kb upstream 1.0kb upstream 4397 true scaffold_7: 13621395-13625791 Theobroma cacao
Thecc1EG032700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13621395-13622394 Theobroma cacao
Thecc1EG032700 1.0kb downstream 1.0kb downstream 4397 true scaffold_7: 13622395-13626791 Theobroma cacao
Thecc1EG032700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13625792-13626791 Theobroma cacao
Thecc1EG032700 2.0kb upstream 2.0kb upstream 5397 true scaffold_7: 13620395-13625791 Theobroma cacao
Thecc1EG032700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13620395-13622394 Theobroma cacao
Thecc1EG032700 2.0kb downstream 2.0kb downstream 5397 true scaffold_7: 13622395-13627791 Theobroma cacao
Thecc1EG032700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13625792-13627791 Theobroma cacao
Thecc1EG032700 5.0kb upstream 5.0kb upstream 8397 true scaffold_7: 13617395-13625791 Theobroma cacao
Thecc1EG032700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13617395-13622394 Theobroma cacao
Thecc1EG032700 5.0kb downstream 5.0kb downstream 8397 true scaffold_7: 13622395-13630791 Theobroma cacao
Thecc1EG032700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13625792-13630791 Theobroma cacao
Thecc1EG032700 10.0kb upstream 10.0kb upstream 13397 true scaffold_7: 13612395-13625791 Theobroma cacao
Thecc1EG032700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13612395-13622394 Theobroma cacao
Thecc1EG032700 10.0kb downstream 10.0kb downstream 13397 true scaffold_7: 13622395-13635791 Theobroma cacao
Thecc1EG032700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13625792-13635791 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824982 5264 Brassicales-Malvales View MSA
124351793 5266 SBM View MSA
124252034 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain