Gene : Thecc1EG032580 T. cacao v1.1

Defline:  (1 of 61) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1514
Name:  ? Thecc1EG032580 Secondary Identifier:  ? PAC:27444414

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032580 0.5kb upstream 0.5kb upstream 43669 true scaffold_7: 12264099-12307767 Theobroma cacao
Thecc1EG032580 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 12307268-12307767 Theobroma cacao
Thecc1EG032580 0.5kb downstream 0.5kb downstream 43669 true scaffold_7: 12263599-12307267 Theobroma cacao
Thecc1EG032580 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 12263599-12264098 Theobroma cacao
Thecc1EG032580 1.0kb upstream 1.0kb upstream 44169 true scaffold_7: 12264099-12308267 Theobroma cacao
Thecc1EG032580 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 12307268-12308267 Theobroma cacao
Thecc1EG032580 1.0kb downstream 1.0kb downstream 44169 true scaffold_7: 12263099-12307267 Theobroma cacao
Thecc1EG032580 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 12263099-12264098 Theobroma cacao
Thecc1EG032580 2.0kb upstream 2.0kb upstream 45169 true scaffold_7: 12264099-12309267 Theobroma cacao
Thecc1EG032580 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 12307268-12309267 Theobroma cacao
Thecc1EG032580 2.0kb downstream 2.0kb downstream 45169 true scaffold_7: 12262099-12307267 Theobroma cacao
Thecc1EG032580 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 12262099-12264098 Theobroma cacao
Thecc1EG032580 5.0kb upstream 5.0kb upstream 48169 true scaffold_7: 12264099-12312267 Theobroma cacao
Thecc1EG032580 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 12307268-12312267 Theobroma cacao
Thecc1EG032580 5.0kb downstream 5.0kb downstream 48169 true scaffold_7: 12259099-12307267 Theobroma cacao
Thecc1EG032580 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 12259099-12264098 Theobroma cacao
Thecc1EG032580 10.0kb upstream 10.0kb upstream 53169 true scaffold_7: 12264099-12317267 Theobroma cacao
Thecc1EG032580 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 12307268-12317267 Theobroma cacao
Thecc1EG032580 10.0kb downstream 10.0kb downstream 53169 true scaffold_7: 12254099-12307267 Theobroma cacao
Thecc1EG032580 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 12254099-12264098 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841836 5264 Brassicales-Malvales View MSA
124351691 5266 SBM View MSA
124249190 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain