Gene : Thecc1EG032430 T. cacao v1.1
Defline:  (1 of 3) K03016 - DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RPB8, POLR2H) Genomic Order:  1432
Name:  ? Thecc1EG032430 Secondary Identifier:  ? PAC:27444189
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032430 0.5kb upstream 0.5kb upstream 4138 true scaffold_7: 10792253-10796390 Theobroma cacao
Thecc1EG032430 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10792253-10792752 Theobroma cacao
Thecc1EG032430 0.5kb downstream 0.5kb downstream 4138 true scaffold_7: 10792753-10796890 Theobroma cacao
Thecc1EG032430 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10796391-10796890 Theobroma cacao
Thecc1EG032430 1.0kb upstream 1.0kb upstream 4638 true scaffold_7: 10791753-10796390 Theobroma cacao
Thecc1EG032430 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10791753-10792752 Theobroma cacao
Thecc1EG032430 1.0kb downstream 1.0kb downstream 4638 true scaffold_7: 10792753-10797390 Theobroma cacao
Thecc1EG032430 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10796391-10797390 Theobroma cacao
Thecc1EG032430 2.0kb upstream 2.0kb upstream 5638 true scaffold_7: 10790753-10796390 Theobroma cacao
Thecc1EG032430 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10790753-10792752 Theobroma cacao
Thecc1EG032430 2.0kb downstream 2.0kb downstream 5638 true scaffold_7: 10792753-10798390 Theobroma cacao
Thecc1EG032430 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10796391-10798390 Theobroma cacao
Thecc1EG032430 5.0kb upstream 5.0kb upstream 8638 true scaffold_7: 10787753-10796390 Theobroma cacao
Thecc1EG032430 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10787753-10792752 Theobroma cacao
Thecc1EG032430 5.0kb downstream 5.0kb downstream 8638 true scaffold_7: 10792753-10801390 Theobroma cacao
Thecc1EG032430 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10796391-10801390 Theobroma cacao
Thecc1EG032430 10.0kb upstream 10.0kb upstream 13638 true scaffold_7: 10782753-10796390 Theobroma cacao
Thecc1EG032430 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10782753-10792752 Theobroma cacao
Thecc1EG032430 10.0kb downstream 10.0kb downstream 13638 true scaffold_7: 10792753-10806390 Theobroma cacao
Thecc1EG032430 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10796391-10806390 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841702 5264 Brassicales-Malvales View MSA
124346830 5266 SBM View MSA
124242683 5268 Malvidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain