Gene : Thecc1EG032389 T. cacao v1.1
Defline:  (1 of 2) PTHR31719//PTHR31719:SF42 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MGH6 Genomic Order:  1405
Name:  ? Thecc1EG032389 Secondary Identifier:  ? PAC:27445037
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032389 0.5kb upstream 0.5kb upstream 2811 true scaffold_7: 10566944-10569754 Theobroma cacao
Thecc1EG032389 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10569255-10569754 Theobroma cacao
Thecc1EG032389 0.5kb downstream 0.5kb downstream 2811 true scaffold_7: 10566444-10569254 Theobroma cacao
Thecc1EG032389 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10566444-10566943 Theobroma cacao
Thecc1EG032389 1.0kb upstream 1.0kb upstream 3311 true scaffold_7: 10566944-10570254 Theobroma cacao
Thecc1EG032389 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10569255-10570254 Theobroma cacao
Thecc1EG032389 1.0kb downstream 1.0kb downstream 3311 true scaffold_7: 10565944-10569254 Theobroma cacao
Thecc1EG032389 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10565944-10566943 Theobroma cacao
Thecc1EG032389 2.0kb upstream 2.0kb upstream 4311 true scaffold_7: 10566944-10571254 Theobroma cacao
Thecc1EG032389 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10569255-10571254 Theobroma cacao
Thecc1EG032389 2.0kb downstream 2.0kb downstream 4311 true scaffold_7: 10564944-10569254 Theobroma cacao
Thecc1EG032389 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10564944-10566943 Theobroma cacao
Thecc1EG032389 5.0kb upstream 5.0kb upstream 7311 true scaffold_7: 10566944-10574254 Theobroma cacao
Thecc1EG032389 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10569255-10574254 Theobroma cacao
Thecc1EG032389 5.0kb downstream 5.0kb downstream 7311 true scaffold_7: 10561944-10569254 Theobroma cacao
Thecc1EG032389 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10561944-10566943 Theobroma cacao
Thecc1EG032389 10.0kb upstream 10.0kb upstream 12311 true scaffold_7: 10566944-10579254 Theobroma cacao
Thecc1EG032389 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10569255-10579254 Theobroma cacao
Thecc1EG032389 10.0kb downstream 10.0kb downstream 12311 true scaffold_7: 10556944-10569254 Theobroma cacao
Thecc1EG032389 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10556944-10566943 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041469 5273 Angiosperm View MSA
123835336 5264 Brassicales-Malvales View MSA
124337604 5266 SBM View MSA
124248038 5268 Malvidae View MSA
124071210 5270 Rosid View MSA
123741758 5271 Pentapetalae View MSA
122786697 5272 Eudicot View MSA
121309853 5274 Embryophyte View MSA
123347498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain