Gene : Thecc1EG032393 T. cacao v1.1
Defline:  (1 of 2) PTHR31719//PTHR31719:SF42 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MGH6 Genomic Order:  1407
Name:  ? Thecc1EG032393 Secondary Identifier:  ? PAC:27445352
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032393 0.5kb upstream 0.5kb upstream 4836 true scaffold_7: 10593390-10598225 Theobroma cacao
Thecc1EG032393 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 10593390-10593889 Theobroma cacao
Thecc1EG032393 0.5kb downstream 0.5kb downstream 4836 true scaffold_7: 10593890-10598725 Theobroma cacao
Thecc1EG032393 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10598226-10598725 Theobroma cacao
Thecc1EG032393 1.0kb upstream 1.0kb upstream 5336 true scaffold_7: 10592890-10598225 Theobroma cacao
Thecc1EG032393 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 10592890-10593889 Theobroma cacao
Thecc1EG032393 1.0kb downstream 1.0kb downstream 5336 true scaffold_7: 10593890-10599225 Theobroma cacao
Thecc1EG032393 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10598226-10599225 Theobroma cacao
Thecc1EG032393 2.0kb upstream 2.0kb upstream 6336 true scaffold_7: 10591890-10598225 Theobroma cacao
Thecc1EG032393 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 10591890-10593889 Theobroma cacao
Thecc1EG032393 2.0kb downstream 2.0kb downstream 6336 true scaffold_7: 10593890-10600225 Theobroma cacao
Thecc1EG032393 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10598226-10600225 Theobroma cacao
Thecc1EG032393 5.0kb upstream 5.0kb upstream 9336 true scaffold_7: 10588890-10598225 Theobroma cacao
Thecc1EG032393 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 10588890-10593889 Theobroma cacao
Thecc1EG032393 5.0kb downstream 5.0kb downstream 9336 true scaffold_7: 10593890-10603225 Theobroma cacao
Thecc1EG032393 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10598226-10603225 Theobroma cacao
Thecc1EG032393 10.0kb upstream 10.0kb upstream 14336 true scaffold_7: 10583890-10598225 Theobroma cacao
Thecc1EG032393 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10583890-10593889 Theobroma cacao
Thecc1EG032393 10.0kb downstream 10.0kb downstream 14336 true scaffold_7: 10593890-10608225 Theobroma cacao
Thecc1EG032393 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10598226-10608225 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041469 5273 Angiosperm View MSA
123835336 5264 Brassicales-Malvales View MSA
124337604 5266 SBM View MSA
124248038 5268 Malvidae View MSA
124071210 5270 Rosid View MSA
123741758 5271 Pentapetalae View MSA
122786697 5272 Eudicot View MSA
121309853 5274 Embryophyte View MSA
123347498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain