Gene : Thecc1EG033484 T. cacao v1.1
Defline:  (1 of 1) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1759
Name:  ? Thecc1EG033484 Secondary Identifier:  ? PAC:27445734
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ANAEROFRUCAT-PWY Theobroma cacao pathologic  
Tcacao ANAGLYCOLYSIS-PWY Theobroma cacao pathologic  
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao PWY-1042 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY66-399 Theobroma cacao pathologic  
Tcacao SUCSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033484 0.5kb upstream 0.5kb upstream 6332 true scaffold_7: 22086579-22092910 Theobroma cacao
Thecc1EG033484 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22086579-22087078 Theobroma cacao
Thecc1EG033484 0.5kb downstream 0.5kb downstream 6332 true scaffold_7: 22087079-22093410 Theobroma cacao
Thecc1EG033484 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22092911-22093410 Theobroma cacao
Thecc1EG033484 1.0kb upstream 1.0kb upstream 6832 true scaffold_7: 22086079-22092910 Theobroma cacao
Thecc1EG033484 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22086079-22087078 Theobroma cacao
Thecc1EG033484 1.0kb downstream 1.0kb downstream 6832 true scaffold_7: 22087079-22093910 Theobroma cacao
Thecc1EG033484 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22092911-22093910 Theobroma cacao
Thecc1EG033484 2.0kb upstream 2.0kb upstream 7832 true scaffold_7: 22085079-22092910 Theobroma cacao
Thecc1EG033484 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22085079-22087078 Theobroma cacao
Thecc1EG033484 2.0kb downstream 2.0kb downstream 7832 true scaffold_7: 22087079-22094910 Theobroma cacao
Thecc1EG033484 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22092911-22094910 Theobroma cacao
Thecc1EG033484 5.0kb upstream 5.0kb upstream 10832 true scaffold_7: 22082079-22092910 Theobroma cacao
Thecc1EG033484 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22082079-22087078 Theobroma cacao
Thecc1EG033484 5.0kb downstream 5.0kb downstream 10832 true scaffold_7: 22087079-22097910 Theobroma cacao
Thecc1EG033484 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22092911-22097910 Theobroma cacao
Thecc1EG033484 10.0kb upstream 10.0kb upstream 15832 true scaffold_7: 22077079-22092910 Theobroma cacao
Thecc1EG033484 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22077079-22087078 Theobroma cacao
Thecc1EG033484 10.0kb downstream 10.0kb downstream 15832 true scaffold_7: 22087079-22102910 Theobroma cacao
Thecc1EG033484 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22092911-22102910 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836882 5264 Brassicales-Malvales View MSA
124346127 5266 SBM View MSA
124243370 5268 Malvidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain