Gene : Thecc1EG033428 T. cacao v1.1
Defline:  (1 of 1) PTHR23076:SF44 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC Genomic Order:  1732
Name:  ? Thecc1EG033428 Secondary Identifier:  ? PAC:27446169
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033428 0.5kb upstream 0.5kb upstream 38075 true scaffold_7: 21502316-21540390 Theobroma cacao
Thecc1EG033428 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 21502316-21502815 Theobroma cacao
Thecc1EG033428 0.5kb downstream 0.5kb downstream 38075 true scaffold_7: 21502816-21540890 Theobroma cacao
Thecc1EG033428 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 21540391-21540890 Theobroma cacao
Thecc1EG033428 1.0kb upstream 1.0kb upstream 38575 true scaffold_7: 21501816-21540390 Theobroma cacao
Thecc1EG033428 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 21501816-21502815 Theobroma cacao
Thecc1EG033428 1.0kb downstream 1.0kb downstream 38575 true scaffold_7: 21502816-21541390 Theobroma cacao
Thecc1EG033428 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 21540391-21541390 Theobroma cacao
Thecc1EG033428 2.0kb upstream 2.0kb upstream 39575 true scaffold_7: 21500816-21540390 Theobroma cacao
Thecc1EG033428 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 21500816-21502815 Theobroma cacao
Thecc1EG033428 2.0kb downstream 2.0kb downstream 39575 true scaffold_7: 21502816-21542390 Theobroma cacao
Thecc1EG033428 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 21540391-21542390 Theobroma cacao
Thecc1EG033428 5.0kb upstream 5.0kb upstream 42575 true scaffold_7: 21497816-21540390 Theobroma cacao
Thecc1EG033428 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 21497816-21502815 Theobroma cacao
Thecc1EG033428 5.0kb downstream 5.0kb downstream 42575 true scaffold_7: 21502816-21545390 Theobroma cacao
Thecc1EG033428 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 21540391-21545390 Theobroma cacao
Thecc1EG033428 10.0kb upstream 10.0kb upstream 47575 true scaffold_7: 21492816-21540390 Theobroma cacao
Thecc1EG033428 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 21492816-21502815 Theobroma cacao
Thecc1EG033428 10.0kb downstream 10.0kb downstream 47575 true scaffold_7: 21502816-21550390 Theobroma cacao
Thecc1EG033428 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 21540391-21550390 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832748 5264 Brassicales-Malvales View MSA
124338369 5266 SBM View MSA
124238329 5268 Malvidae View MSA
124065156 5270 Rosid View MSA
123736901 5271 Pentapetalae View MSA
122790141 5272 Eudicot View MSA
122047012 5273 Angiosperm View MSA
121345468 5274 Embryophyte View MSA
123380221 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain