Gene : Thecc1EG033351 T. cacao v1.1
Defline:  (1 of 1) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1702
Name:  ? Thecc1EG033351 Secondary Identifier:  ? PAC:27445205
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ANAEROFRUCAT-PWY Theobroma cacao pathologic  
Tcacao ANAGLYCOLYSIS-PWY Theobroma cacao pathologic  
Tcacao CALVIN-PWY Theobroma cacao pathologic  
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-1042 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY66-399 Theobroma cacao pathologic  
Tcacao SUCSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033351 0.5kb upstream 0.5kb upstream 5879 true scaffold_7: 20809466-20815344 Theobroma cacao
Thecc1EG033351 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 20809466-20809965 Theobroma cacao
Thecc1EG033351 0.5kb downstream 0.5kb downstream 5879 true scaffold_7: 20809966-20815844 Theobroma cacao
Thecc1EG033351 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 20815345-20815844 Theobroma cacao
Thecc1EG033351 1.0kb upstream 1.0kb upstream 6379 true scaffold_7: 20808966-20815344 Theobroma cacao
Thecc1EG033351 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 20808966-20809965 Theobroma cacao
Thecc1EG033351 1.0kb downstream 1.0kb downstream 6379 true scaffold_7: 20809966-20816344 Theobroma cacao
Thecc1EG033351 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 20815345-20816344 Theobroma cacao
Thecc1EG033351 2.0kb upstream 2.0kb upstream 7379 true scaffold_7: 20807966-20815344 Theobroma cacao
Thecc1EG033351 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 20807966-20809965 Theobroma cacao
Thecc1EG033351 2.0kb downstream 2.0kb downstream 7379 true scaffold_7: 20809966-20817344 Theobroma cacao
Thecc1EG033351 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 20815345-20817344 Theobroma cacao
Thecc1EG033351 5.0kb upstream 5.0kb upstream 10379 true scaffold_7: 20804966-20815344 Theobroma cacao
Thecc1EG033351 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 20804966-20809965 Theobroma cacao
Thecc1EG033351 5.0kb downstream 5.0kb downstream 10379 true scaffold_7: 20809966-20820344 Theobroma cacao
Thecc1EG033351 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 20815345-20820344 Theobroma cacao
Thecc1EG033351 10.0kb upstream 10.0kb upstream 15379 true scaffold_7: 20799966-20815344 Theobroma cacao
Thecc1EG033351 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 20799966-20809965 Theobroma cacao
Thecc1EG033351 10.0kb downstream 10.0kb downstream 15379 true scaffold_7: 20809966-20825344 Theobroma cacao
Thecc1EG033351 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 20815345-20825344 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832866 5264 Brassicales-Malvales View MSA
124347781 5266 SBM View MSA
124238345 5268 Malvidae View MSA
124066937 5270 Rosid View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain