Gene : Thecc1EG033339 T. cacao v1.1

Defline:  Uncharacterized protein Genomic Order:  1698
Name:  ? Thecc1EG033339 Secondary Identifier:  ? PAC:27444157

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033339 0.5kb upstream 0.5kb upstream 1229 true scaffold_7: 20684858-20686086 Theobroma cacao
Thecc1EG033339 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 20684858-20685357 Theobroma cacao
Thecc1EG033339 0.5kb downstream 0.5kb downstream 1229 true scaffold_7: 20685358-20686586 Theobroma cacao
Thecc1EG033339 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 20686087-20686586 Theobroma cacao
Thecc1EG033339 1.0kb upstream 1.0kb upstream 1729 true scaffold_7: 20684358-20686086 Theobroma cacao
Thecc1EG033339 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 20684358-20685357 Theobroma cacao
Thecc1EG033339 1.0kb downstream 1.0kb downstream 1729 true scaffold_7: 20685358-20687086 Theobroma cacao
Thecc1EG033339 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 20686087-20687086 Theobroma cacao
Thecc1EG033339 2.0kb upstream 2.0kb upstream 2729 true scaffold_7: 20683358-20686086 Theobroma cacao
Thecc1EG033339 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 20683358-20685357 Theobroma cacao
Thecc1EG033339 2.0kb downstream 2.0kb downstream 2729 true scaffold_7: 20685358-20688086 Theobroma cacao
Thecc1EG033339 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 20686087-20688086 Theobroma cacao
Thecc1EG033339 5.0kb upstream 5.0kb upstream 5729 true scaffold_7: 20680358-20686086 Theobroma cacao
Thecc1EG033339 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 20680358-20685357 Theobroma cacao
Thecc1EG033339 5.0kb downstream 5.0kb downstream 5729 true scaffold_7: 20685358-20691086 Theobroma cacao
Thecc1EG033339 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 20686087-20691086 Theobroma cacao
Thecc1EG033339 10.0kb upstream 10.0kb upstream 10729 true scaffold_7: 20675358-20686086 Theobroma cacao
Thecc1EG033339 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 20675358-20685357 Theobroma cacao
Thecc1EG033339 10.0kb downstream 10.0kb downstream 10729 true scaffold_7: 20685358-20696086 Theobroma cacao
Thecc1EG033339 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 20686087-20696086 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121523169 5273 Angiosperm Singleton cluster - no MSA
123821404 5264 Brassicales-Malvales Singleton cluster - no MSA
124317578 5266 SBM Singleton cluster - no MSA
124166296 5268 Malvidae Singleton cluster - no MSA
123889907 5270 Rosid Singleton cluster - no MSA
123472263 5271 Pentapetalae Singleton cluster - no MSA
122507551 5272 Eudicot Singleton cluster - no MSA
120795962 5274 Embryophyte Singleton cluster - no MSA
122837551 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain