Gene : Thecc1EG046860 T. cacao v1.1
Defline:  (1 of 24) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  603
Name:  ? Thecc1EG046860 Secondary Identifier:  ? PAC:27446300
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046860 0.5kb upstream 0.5kb upstream 5179 true scaffold_7: 3617342-3622520 Theobroma cacao
Thecc1EG046860 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3617342-3617841 Theobroma cacao
Thecc1EG046860 0.5kb downstream 0.5kb downstream 5179 true scaffold_7: 3617842-3623020 Theobroma cacao
Thecc1EG046860 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3622521-3623020 Theobroma cacao
Thecc1EG046860 1.0kb upstream 1.0kb upstream 5679 true scaffold_7: 3616842-3622520 Theobroma cacao
Thecc1EG046860 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3616842-3617841 Theobroma cacao
Thecc1EG046860 1.0kb downstream 1.0kb downstream 5679 true scaffold_7: 3617842-3623520 Theobroma cacao
Thecc1EG046860 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3622521-3623520 Theobroma cacao
Thecc1EG046860 2.0kb upstream 2.0kb upstream 6679 true scaffold_7: 3615842-3622520 Theobroma cacao
Thecc1EG046860 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3615842-3617841 Theobroma cacao
Thecc1EG046860 2.0kb downstream 2.0kb downstream 6679 true scaffold_7: 3617842-3624520 Theobroma cacao
Thecc1EG046860 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3622521-3624520 Theobroma cacao
Thecc1EG046860 5.0kb upstream 5.0kb upstream 9679 true scaffold_7: 3612842-3622520 Theobroma cacao
Thecc1EG046860 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3612842-3617841 Theobroma cacao
Thecc1EG046860 5.0kb downstream 5.0kb downstream 9679 true scaffold_7: 3617842-3627520 Theobroma cacao
Thecc1EG046860 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3622521-3627520 Theobroma cacao
Thecc1EG046860 10.0kb upstream 10.0kb upstream 14679 true scaffold_7: 3607842-3622520 Theobroma cacao
Thecc1EG046860 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3607842-3617841 Theobroma cacao
Thecc1EG046860 10.0kb downstream 10.0kb downstream 14679 true scaffold_7: 3617842-3632520 Theobroma cacao
Thecc1EG046860 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3622521-3632520 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830379 5264 Brassicales-Malvales View MSA
124350841 5266 SBM View MSA
124252991 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain