Gene : Thecc1EG033701 T. cacao v1.1
Defline:  (1 of 3) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  1850
Name:  ? Thecc1EG033701 Secondary Identifier:  ? PAC:27444236
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6549 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033701 0.5kb upstream 0.5kb upstream 9461 true scaffold_7: 24022957-24032417 Theobroma cacao
Thecc1EG033701 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24022957-24023456 Theobroma cacao
Thecc1EG033701 0.5kb downstream 0.5kb downstream 9461 true scaffold_7: 24023457-24032917 Theobroma cacao
Thecc1EG033701 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24032418-24032917 Theobroma cacao
Thecc1EG033701 1.0kb upstream 1.0kb upstream 9961 true scaffold_7: 24022457-24032417 Theobroma cacao
Thecc1EG033701 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24022457-24023456 Theobroma cacao
Thecc1EG033701 1.0kb downstream 1.0kb downstream 9961 true scaffold_7: 24023457-24033417 Theobroma cacao
Thecc1EG033701 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24032418-24033417 Theobroma cacao
Thecc1EG033701 2.0kb upstream 2.0kb upstream 10961 true scaffold_7: 24021457-24032417 Theobroma cacao
Thecc1EG033701 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24021457-24023456 Theobroma cacao
Thecc1EG033701 2.0kb downstream 2.0kb downstream 10961 true scaffold_7: 24023457-24034417 Theobroma cacao
Thecc1EG033701 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24032418-24034417 Theobroma cacao
Thecc1EG033701 5.0kb upstream 5.0kb upstream 13961 true scaffold_7: 24018457-24032417 Theobroma cacao
Thecc1EG033701 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24018457-24023456 Theobroma cacao
Thecc1EG033701 5.0kb downstream 5.0kb downstream 13961 true scaffold_7: 24023457-24037417 Theobroma cacao
Thecc1EG033701 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24032418-24037417 Theobroma cacao
Thecc1EG033701 10.0kb upstream 10.0kb upstream 18961 true scaffold_7: 24013457-24032417 Theobroma cacao
Thecc1EG033701 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24013457-24023456 Theobroma cacao
Thecc1EG033701 10.0kb downstream 10.0kb downstream 18961 true scaffold_7: 24023457-24042417 Theobroma cacao
Thecc1EG033701 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24032418-24042417 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826491 5264 Brassicales-Malvales View MSA
124321063 5266 SBM View MSA
124253615 5268 Malvidae View MSA
124070230 5270 Rosid View MSA
123744673 5271 Pentapetalae View MSA
122792686 5272 Eudicot View MSA
122045414 5273 Angiosperm View MSA
121351363 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain