Gene : Thecc1EG033675 T. cacao v1.1
Defline:  (1 of 1) 1.2.1.24 - Succinate-semialdehyde dehydrogenase (NAD(+)) Genomic Order:  1843
Name:  ? Thecc1EG033675 Secondary Identifier:  ? PAC:27446461
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLUDEG-I-PWY Theobroma cacao pathologic  
Tcacao PWY-4321 Theobroma cacao pathologic  
Tcacao PWY-6473 Theobroma cacao pathologic  
Tcacao PWY-6535 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033675 0.5kb upstream 0.5kb upstream 30555 true scaffold_7: 23740018-23770572 Theobroma cacao
Thecc1EG033675 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 23770073-23770572 Theobroma cacao
Thecc1EG033675 0.5kb downstream 0.5kb downstream 30555 true scaffold_7: 23739518-23770072 Theobroma cacao
Thecc1EG033675 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 23739518-23740017 Theobroma cacao
Thecc1EG033675 1.0kb upstream 1.0kb upstream 31055 true scaffold_7: 23740018-23771072 Theobroma cacao
Thecc1EG033675 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 23770073-23771072 Theobroma cacao
Thecc1EG033675 1.0kb downstream 1.0kb downstream 31055 true scaffold_7: 23739018-23770072 Theobroma cacao
Thecc1EG033675 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 23739018-23740017 Theobroma cacao
Thecc1EG033675 2.0kb upstream 2.0kb upstream 32055 true scaffold_7: 23740018-23772072 Theobroma cacao
Thecc1EG033675 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 23770073-23772072 Theobroma cacao
Thecc1EG033675 2.0kb downstream 2.0kb downstream 32055 true scaffold_7: 23738018-23770072 Theobroma cacao
Thecc1EG033675 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 23738018-23740017 Theobroma cacao
Thecc1EG033675 5.0kb upstream 5.0kb upstream 35055 true scaffold_7: 23740018-23775072 Theobroma cacao
Thecc1EG033675 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 23770073-23775072 Theobroma cacao
Thecc1EG033675 5.0kb downstream 5.0kb downstream 35055 true scaffold_7: 23735018-23770072 Theobroma cacao
Thecc1EG033675 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23735018-23740017 Theobroma cacao
Thecc1EG033675 10.0kb upstream 10.0kb upstream 40055 true scaffold_7: 23740018-23780072 Theobroma cacao
Thecc1EG033675 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 23770073-23780072 Theobroma cacao
Thecc1EG033675 10.0kb downstream 10.0kb downstream 40055 true scaffold_7: 23730018-23770072 Theobroma cacao
Thecc1EG033675 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 23730018-23740017 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832522 5264 Brassicales-Malvales View MSA
124343757 5266 SBM View MSA
124242671 5268 Malvidae View MSA
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain