Gene : Thecc1EG033669 T. cacao v1.1

Defline:  (1 of 7) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  1840
Name:  ? Thecc1EG033669 Secondary Identifier:  ? PAC:27444770

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033669 0.5kb upstream 0.5kb upstream 3385 true scaffold_7: 23654231-23657615 Theobroma cacao
Thecc1EG033669 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 23654231-23654730 Theobroma cacao
Thecc1EG033669 0.5kb downstream 0.5kb downstream 3385 true scaffold_7: 23654731-23658115 Theobroma cacao
Thecc1EG033669 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 23657616-23658115 Theobroma cacao
Thecc1EG033669 1.0kb upstream 1.0kb upstream 3885 true scaffold_7: 23653731-23657615 Theobroma cacao
Thecc1EG033669 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 23653731-23654730 Theobroma cacao
Thecc1EG033669 1.0kb downstream 1.0kb downstream 3885 true scaffold_7: 23654731-23658615 Theobroma cacao
Thecc1EG033669 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 23657616-23658615 Theobroma cacao
Thecc1EG033669 2.0kb upstream 2.0kb upstream 4885 true scaffold_7: 23652731-23657615 Theobroma cacao
Thecc1EG033669 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 23652731-23654730 Theobroma cacao
Thecc1EG033669 2.0kb downstream 2.0kb downstream 4885 true scaffold_7: 23654731-23659615 Theobroma cacao
Thecc1EG033669 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 23657616-23659615 Theobroma cacao
Thecc1EG033669 5.0kb upstream 5.0kb upstream 7885 true scaffold_7: 23649731-23657615 Theobroma cacao
Thecc1EG033669 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 23649731-23654730 Theobroma cacao
Thecc1EG033669 5.0kb downstream 5.0kb downstream 7885 true scaffold_7: 23654731-23662615 Theobroma cacao
Thecc1EG033669 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23657616-23662615 Theobroma cacao
Thecc1EG033669 10.0kb upstream 10.0kb upstream 12885 true scaffold_7: 23644731-23657615 Theobroma cacao
Thecc1EG033669 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 23644731-23654730 Theobroma cacao
Thecc1EG033669 10.0kb downstream 10.0kb downstream 12885 true scaffold_7: 23654731-23667615 Theobroma cacao
Thecc1EG033669 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 23657616-23667615 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827344 5264 Brassicales-Malvales View MSA
124345467 5266 SBM View MSA
124242178 5268 Malvidae View MSA
124065577 5270 Rosid View MSA
123739517 5271 Pentapetalae View MSA
122769955 5272 Eudicot View MSA
122044240 5273 Angiosperm View MSA
121310259 5274 Embryophyte View MSA
123347798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain