Gene : Thecc1EG033848 T. cacao v1.1
Defline:  (1 of 3) PF13202//PF13405 - EF hand (EF-hand_5) // EF-hand domain (EF-hand_6) Genomic Order:  82
Name:  ? Thecc1EG033848 Secondary Identifier:  ? PAC:27458848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033848 0.5kb upstream 0.5kb upstream 1034 true scaffold_8: 431648-432681 Theobroma cacao
Thecc1EG033848 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 431648-432147 Theobroma cacao
Thecc1EG033848 0.5kb downstream 0.5kb downstream 1034 true scaffold_8: 432148-433181 Theobroma cacao
Thecc1EG033848 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 432682-433181 Theobroma cacao
Thecc1EG033848 1.0kb upstream 1.0kb upstream 1534 true scaffold_8: 431148-432681 Theobroma cacao
Thecc1EG033848 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 431148-432147 Theobroma cacao
Thecc1EG033848 1.0kb downstream 1.0kb downstream 1534 true scaffold_8: 432148-433681 Theobroma cacao
Thecc1EG033848 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 432682-433681 Theobroma cacao
Thecc1EG033848 2.0kb upstream 2.0kb upstream 2534 true scaffold_8: 430148-432681 Theobroma cacao
Thecc1EG033848 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 430148-432147 Theobroma cacao
Thecc1EG033848 2.0kb downstream 2.0kb downstream 2534 true scaffold_8: 432148-434681 Theobroma cacao
Thecc1EG033848 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 432682-434681 Theobroma cacao
Thecc1EG033848 5.0kb upstream 5.0kb upstream 5534 true scaffold_8: 427148-432681 Theobroma cacao
Thecc1EG033848 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 427148-432147 Theobroma cacao
Thecc1EG033848 5.0kb downstream 5.0kb downstream 5534 true scaffold_8: 432148-437681 Theobroma cacao
Thecc1EG033848 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 432682-437681 Theobroma cacao
Thecc1EG033848 10.0kb upstream 10.0kb upstream 10534 true scaffold_8: 422148-432681 Theobroma cacao
Thecc1EG033848 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 422148-432147 Theobroma cacao
Thecc1EG033848 10.0kb downstream 10.0kb downstream 10534 true scaffold_8: 432148-442681 Theobroma cacao
Thecc1EG033848 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 432682-442681 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822387 5264 Brassicales-Malvales Singleton cluster - no MSA
124318524 5266 SBM Singleton cluster - no MSA
124249178 5268 Malvidae View MSA
124072679 5270 Rosid View MSA
123744688 5271 Pentapetalae View MSA
122796930 5272 Eudicot View MSA
122050507 5273 Angiosperm View MSA
121311953 5274 Embryophyte View MSA
123349178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain