Gene : Thecc1EG033820 T. cacao v1.1
Defline:  (1 of 1) PTHR21493//PTHR21493:SF104 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  55
Name:  ? Thecc1EG033820 Secondary Identifier:  ? PAC:27456989
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033820 0.5kb upstream 0.5kb upstream 8535 true scaffold_8: 322238-330772 Theobroma cacao
Thecc1EG033820 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 322238-322737 Theobroma cacao
Thecc1EG033820 0.5kb downstream 0.5kb downstream 8535 true scaffold_8: 322738-331272 Theobroma cacao
Thecc1EG033820 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 330773-331272 Theobroma cacao
Thecc1EG033820 1.0kb upstream 1.0kb upstream 9035 true scaffold_8: 321738-330772 Theobroma cacao
Thecc1EG033820 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 321738-322737 Theobroma cacao
Thecc1EG033820 1.0kb downstream 1.0kb downstream 9035 true scaffold_8: 322738-331772 Theobroma cacao
Thecc1EG033820 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 330773-331772 Theobroma cacao
Thecc1EG033820 2.0kb upstream 2.0kb upstream 10035 true scaffold_8: 320738-330772 Theobroma cacao
Thecc1EG033820 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 320738-322737 Theobroma cacao
Thecc1EG033820 2.0kb downstream 2.0kb downstream 10035 true scaffold_8: 322738-332772 Theobroma cacao
Thecc1EG033820 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 330773-332772 Theobroma cacao
Thecc1EG033820 5.0kb upstream 5.0kb upstream 13035 true scaffold_8: 317738-330772 Theobroma cacao
Thecc1EG033820 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 317738-322737 Theobroma cacao
Thecc1EG033820 5.0kb downstream 5.0kb downstream 13035 true scaffold_8: 322738-335772 Theobroma cacao
Thecc1EG033820 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 330773-335772 Theobroma cacao
Thecc1EG033820 10.0kb upstream 10.0kb upstream 18035 true scaffold_8: 312738-330772 Theobroma cacao
Thecc1EG033820 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 312738-322737 Theobroma cacao
Thecc1EG033820 10.0kb downstream 10.0kb downstream 18035 true scaffold_8: 322738-340772 Theobroma cacao
Thecc1EG033820 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 330773-340772 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828194 5264 Brassicales-Malvales View MSA
124345442 5266 SBM View MSA
124242936 5268 Malvidae View MSA
124069453 5270 Rosid View MSA
123746073 5271 Pentapetalae View MSA
122791572 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain