Gene : Thecc1EG033796 T. cacao v1.1
Defline:  (1 of 18) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  35
Name:  ? Thecc1EG033796 Secondary Identifier:  ? PAC:27459502
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  
Tcacao PWY-6040 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033796 0.5kb upstream 0.5kb upstream 2845 true scaffold_8: 208942-211786 Theobroma cacao
Thecc1EG033796 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 208942-209441 Theobroma cacao
Thecc1EG033796 0.5kb downstream 0.5kb downstream 2845 true scaffold_8: 209442-212286 Theobroma cacao
Thecc1EG033796 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 211787-212286 Theobroma cacao
Thecc1EG033796 1.0kb upstream 1.0kb upstream 3345 true scaffold_8: 208442-211786 Theobroma cacao
Thecc1EG033796 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 208442-209441 Theobroma cacao
Thecc1EG033796 1.0kb downstream 1.0kb downstream 3345 true scaffold_8: 209442-212786 Theobroma cacao
Thecc1EG033796 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 211787-212786 Theobroma cacao
Thecc1EG033796 2.0kb upstream 2.0kb upstream 4345 true scaffold_8: 207442-211786 Theobroma cacao
Thecc1EG033796 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 207442-209441 Theobroma cacao
Thecc1EG033796 2.0kb downstream 2.0kb downstream 4345 true scaffold_8: 209442-213786 Theobroma cacao
Thecc1EG033796 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 211787-213786 Theobroma cacao
Thecc1EG033796 5.0kb upstream 5.0kb upstream 7345 true scaffold_8: 204442-211786 Theobroma cacao
Thecc1EG033796 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 204442-209441 Theobroma cacao
Thecc1EG033796 5.0kb downstream 5.0kb downstream 7345 true scaffold_8: 209442-216786 Theobroma cacao
Thecc1EG033796 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 211787-216786 Theobroma cacao
Thecc1EG033796 10.0kb upstream 10.0kb upstream 12345 true scaffold_8: 199442-211786 Theobroma cacao
Thecc1EG033796 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 199442-209441 Theobroma cacao
Thecc1EG033796 10.0kb downstream 10.0kb downstream 12345 true scaffold_8: 209442-221786 Theobroma cacao
Thecc1EG033796 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 211787-221786 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837047 5264 Brassicales-Malvales View MSA
124344144 5266 SBM View MSA
124238828 5268 Malvidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain