Gene : Thecc1EG033800 T. cacao v1.1
Defline:  (1 of 2) K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Genomic Order:  38
Name:  ? Thecc1EG033800 Secondary Identifier:  ? PAC:27458294
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033800 0.5kb upstream 0.5kb upstream 6208 true scaffold_8: 225078-231285 Theobroma cacao
Thecc1EG033800 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 225078-225577 Theobroma cacao
Thecc1EG033800 0.5kb downstream 0.5kb downstream 6208 true scaffold_8: 225578-231785 Theobroma cacao
Thecc1EG033800 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 231286-231785 Theobroma cacao
Thecc1EG033800 1.0kb upstream 1.0kb upstream 6708 true scaffold_8: 224578-231285 Theobroma cacao
Thecc1EG033800 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 224578-225577 Theobroma cacao
Thecc1EG033800 1.0kb downstream 1.0kb downstream 6708 true scaffold_8: 225578-232285 Theobroma cacao
Thecc1EG033800 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 231286-232285 Theobroma cacao
Thecc1EG033800 2.0kb upstream 2.0kb upstream 7708 true scaffold_8: 223578-231285 Theobroma cacao
Thecc1EG033800 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 223578-225577 Theobroma cacao
Thecc1EG033800 2.0kb downstream 2.0kb downstream 7708 true scaffold_8: 225578-233285 Theobroma cacao
Thecc1EG033800 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 231286-233285 Theobroma cacao
Thecc1EG033800 5.0kb upstream 5.0kb upstream 10708 true scaffold_8: 220578-231285 Theobroma cacao
Thecc1EG033800 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 220578-225577 Theobroma cacao
Thecc1EG033800 5.0kb downstream 5.0kb downstream 10708 true scaffold_8: 225578-236285 Theobroma cacao
Thecc1EG033800 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 231286-236285 Theobroma cacao
Thecc1EG033800 10.0kb upstream 10.0kb upstream 15708 true scaffold_8: 215578-231285 Theobroma cacao
Thecc1EG033800 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 215578-225577 Theobroma cacao
Thecc1EG033800 10.0kb downstream 10.0kb downstream 15708 true scaffold_8: 225578-241285 Theobroma cacao
Thecc1EG033800 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 231286-241285 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839935 5264 Brassicales-Malvales View MSA
124344629 5266 SBM View MSA
124251386 5268 Malvidae View MSA
124061889 5270 Rosid View MSA
123751364 5271 Pentapetalae View MSA
122793070 5272 Eudicot View MSA
122041627 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain