Gene : Thecc1EG034116 T. cacao v1.1
Defline:  (1 of 2) PTHR11850//PTHR11850:SF65 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 6-RELATED Genomic Order:  328
Name:  ? Thecc1EG034116 Secondary Identifier:  ? PAC:27459016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034116 0.5kb upstream 0.5kb upstream 5781 true scaffold_8: 1500330-1506110 Theobroma cacao
Thecc1EG034116 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1500330-1500829 Theobroma cacao
Thecc1EG034116 0.5kb downstream 0.5kb downstream 5781 true scaffold_8: 1500830-1506610 Theobroma cacao
Thecc1EG034116 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1506111-1506610 Theobroma cacao
Thecc1EG034116 1.0kb upstream 1.0kb upstream 6281 true scaffold_8: 1499830-1506110 Theobroma cacao
Thecc1EG034116 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1499830-1500829 Theobroma cacao
Thecc1EG034116 1.0kb downstream 1.0kb downstream 6281 true scaffold_8: 1500830-1507110 Theobroma cacao
Thecc1EG034116 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1506111-1507110 Theobroma cacao
Thecc1EG034116 2.0kb upstream 2.0kb upstream 7281 true scaffold_8: 1498830-1506110 Theobroma cacao
Thecc1EG034116 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1498830-1500829 Theobroma cacao
Thecc1EG034116 2.0kb downstream 2.0kb downstream 7281 true scaffold_8: 1500830-1508110 Theobroma cacao
Thecc1EG034116 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1506111-1508110 Theobroma cacao
Thecc1EG034116 5.0kb upstream 5.0kb upstream 10281 true scaffold_8: 1495830-1506110 Theobroma cacao
Thecc1EG034116 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1495830-1500829 Theobroma cacao
Thecc1EG034116 5.0kb downstream 5.0kb downstream 10281 true scaffold_8: 1500830-1511110 Theobroma cacao
Thecc1EG034116 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1506111-1511110 Theobroma cacao
Thecc1EG034116 10.0kb upstream 10.0kb upstream 15281 true scaffold_8: 1490830-1506110 Theobroma cacao
Thecc1EG034116 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1490830-1500829 Theobroma cacao
Thecc1EG034116 10.0kb downstream 10.0kb downstream 15281 true scaffold_8: 1500830-1516110 Theobroma cacao
Thecc1EG034116 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1506111-1516110 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836772 5264 Brassicales-Malvales View MSA
124340085 5266 SBM View MSA
124245749 5268 Malvidae View MSA
124069804 5270 Rosid View MSA
123753469 5271 Pentapetalae View MSA
122794257 5272 Eudicot View MSA
122051501 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain