Gene : Thecc1EG034106 T. cacao v1.1

Defline:  (1 of 4) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  317
Name:  ? Thecc1EG034106 Secondary Identifier:  ? PAC:27456910

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034106 0.5kb upstream 0.5kb upstream 1345 true scaffold_8: 1460890-1462234 Theobroma cacao
Thecc1EG034106 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1460890-1461389 Theobroma cacao
Thecc1EG034106 0.5kb downstream 0.5kb downstream 1345 true scaffold_8: 1461390-1462734 Theobroma cacao
Thecc1EG034106 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1462235-1462734 Theobroma cacao
Thecc1EG034106 1.0kb upstream 1.0kb upstream 1845 true scaffold_8: 1460390-1462234 Theobroma cacao
Thecc1EG034106 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1460390-1461389 Theobroma cacao
Thecc1EG034106 1.0kb downstream 1.0kb downstream 1845 true scaffold_8: 1461390-1463234 Theobroma cacao
Thecc1EG034106 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1462235-1463234 Theobroma cacao
Thecc1EG034106 2.0kb upstream 2.0kb upstream 2845 true scaffold_8: 1459390-1462234 Theobroma cacao
Thecc1EG034106 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1459390-1461389 Theobroma cacao
Thecc1EG034106 2.0kb downstream 2.0kb downstream 2845 true scaffold_8: 1461390-1464234 Theobroma cacao
Thecc1EG034106 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1462235-1464234 Theobroma cacao
Thecc1EG034106 5.0kb upstream 5.0kb upstream 5845 true scaffold_8: 1456390-1462234 Theobroma cacao
Thecc1EG034106 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1456390-1461389 Theobroma cacao
Thecc1EG034106 5.0kb downstream 5.0kb downstream 5845 true scaffold_8: 1461390-1467234 Theobroma cacao
Thecc1EG034106 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1462235-1467234 Theobroma cacao
Thecc1EG034106 10.0kb upstream 10.0kb upstream 10845 true scaffold_8: 1451390-1462234 Theobroma cacao
Thecc1EG034106 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1451390-1461389 Theobroma cacao
Thecc1EG034106 10.0kb downstream 10.0kb downstream 10845 true scaffold_8: 1461390-1472234 Theobroma cacao
Thecc1EG034106 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1462235-1472234 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839150 5264 Brassicales-Malvales View MSA
124350098 5266 SBM View MSA
124247996 5268 Malvidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain