Gene : Thecc1EG034074 T. cacao v1.1
Defline:  (1 of 1) K02725 - 20S proteasome subunit alpha 6 (PSMA1) Genomic Order:  288
Name:  ? Thecc1EG034074 Secondary Identifier:  ? PAC:27459438
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034074 0.5kb upstream 0.5kb upstream 3294 true scaffold_8: 1311971-1315264 Theobroma cacao
Thecc1EG034074 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1314765-1315264 Theobroma cacao
Thecc1EG034074 0.5kb downstream 0.5kb downstream 3294 true scaffold_8: 1311471-1314764 Theobroma cacao
Thecc1EG034074 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1311471-1311970 Theobroma cacao
Thecc1EG034074 1.0kb upstream 1.0kb upstream 3794 true scaffold_8: 1311971-1315764 Theobroma cacao
Thecc1EG034074 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1314765-1315764 Theobroma cacao
Thecc1EG034074 1.0kb downstream 1.0kb downstream 3794 true scaffold_8: 1310971-1314764 Theobroma cacao
Thecc1EG034074 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1310971-1311970 Theobroma cacao
Thecc1EG034074 2.0kb upstream 2.0kb upstream 4794 true scaffold_8: 1311971-1316764 Theobroma cacao
Thecc1EG034074 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1314765-1316764 Theobroma cacao
Thecc1EG034074 2.0kb downstream 2.0kb downstream 4794 true scaffold_8: 1309971-1314764 Theobroma cacao
Thecc1EG034074 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1309971-1311970 Theobroma cacao
Thecc1EG034074 5.0kb upstream 5.0kb upstream 7794 true scaffold_8: 1311971-1319764 Theobroma cacao
Thecc1EG034074 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1314765-1319764 Theobroma cacao
Thecc1EG034074 5.0kb downstream 5.0kb downstream 7794 true scaffold_8: 1306971-1314764 Theobroma cacao
Thecc1EG034074 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1306971-1311970 Theobroma cacao
Thecc1EG034074 10.0kb upstream 10.0kb upstream 12794 true scaffold_8: 1311971-1324764 Theobroma cacao
Thecc1EG034074 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1314765-1324764 Theobroma cacao
Thecc1EG034074 10.0kb downstream 10.0kb downstream 12794 true scaffold_8: 1301971-1314764 Theobroma cacao
Thecc1EG034074 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1301971-1311970 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838687 5264 Brassicales-Malvales View MSA
124340801 5266 SBM View MSA
124251312 5268 Malvidae View MSA
124065992 5270 Rosid View MSA
123739295 5271 Pentapetalae View MSA
122791097 5272 Eudicot View MSA
122046892 5273 Angiosperm View MSA
121347001 5274 Embryophyte View MSA
123424863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain