Gene : Thecc1EG034077 T. cacao v1.1
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  291
Name:  ? Thecc1EG034077 Secondary Identifier:  ? PAC:27457181
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARGSYNBSUB-PWY Theobroma cacao pathologic  
Tcacao ARGSYN-PWY Theobroma cacao pathologic  
Tcacao CITRULBIO-PWY Theobroma cacao pathologic  
Tcacao CITRULLINE-DEG-PWY Theobroma cacao pathologic  
Tcacao PWY-4984 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034077 0.5kb upstream 0.5kb upstream 3841 true scaffold_8: 1322570-1326410 Theobroma cacao
Thecc1EG034077 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1325911-1326410 Theobroma cacao
Thecc1EG034077 0.5kb downstream 0.5kb downstream 3841 true scaffold_8: 1322070-1325910 Theobroma cacao
Thecc1EG034077 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1322070-1322569 Theobroma cacao
Thecc1EG034077 1.0kb upstream 1.0kb upstream 4341 true scaffold_8: 1322570-1326910 Theobroma cacao
Thecc1EG034077 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1325911-1326910 Theobroma cacao
Thecc1EG034077 1.0kb downstream 1.0kb downstream 4341 true scaffold_8: 1321570-1325910 Theobroma cacao
Thecc1EG034077 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1321570-1322569 Theobroma cacao
Thecc1EG034077 2.0kb upstream 2.0kb upstream 5341 true scaffold_8: 1322570-1327910 Theobroma cacao
Thecc1EG034077 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1325911-1327910 Theobroma cacao
Thecc1EG034077 2.0kb downstream 2.0kb downstream 5341 true scaffold_8: 1320570-1325910 Theobroma cacao
Thecc1EG034077 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1320570-1322569 Theobroma cacao
Thecc1EG034077 5.0kb upstream 5.0kb upstream 8341 true scaffold_8: 1322570-1330910 Theobroma cacao
Thecc1EG034077 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1325911-1330910 Theobroma cacao
Thecc1EG034077 5.0kb downstream 5.0kb downstream 8341 true scaffold_8: 1317570-1325910 Theobroma cacao
Thecc1EG034077 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1317570-1322569 Theobroma cacao
Thecc1EG034077 10.0kb upstream 10.0kb upstream 13341 true scaffold_8: 1322570-1335910 Theobroma cacao
Thecc1EG034077 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1325911-1335910 Theobroma cacao
Thecc1EG034077 10.0kb downstream 10.0kb downstream 13341 true scaffold_8: 1312570-1325910 Theobroma cacao
Thecc1EG034077 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1312570-1322569 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830074 5264 Brassicales-Malvales View MSA
124343183 5266 SBM View MSA
124239745 5268 Malvidae View MSA
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain