Gene : Thecc1EG034018 T. cacao v1.1
Defline:  (1 of 7) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  238
Name:  ? Thecc1EG034018 Secondary Identifier:  ? PAC:27458772
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034018 0.5kb upstream 0.5kb upstream 6591 true scaffold_8: 1106851-1113441 Theobroma cacao
Thecc1EG034018 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1106851-1107350 Theobroma cacao
Thecc1EG034018 0.5kb downstream 0.5kb downstream 6591 true scaffold_8: 1107351-1113941 Theobroma cacao
Thecc1EG034018 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1113442-1113941 Theobroma cacao
Thecc1EG034018 1.0kb upstream 1.0kb upstream 7091 true scaffold_8: 1106351-1113441 Theobroma cacao
Thecc1EG034018 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1106351-1107350 Theobroma cacao
Thecc1EG034018 1.0kb downstream 1.0kb downstream 7091 true scaffold_8: 1107351-1114441 Theobroma cacao
Thecc1EG034018 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1113442-1114441 Theobroma cacao
Thecc1EG034018 2.0kb upstream 2.0kb upstream 8091 true scaffold_8: 1105351-1113441 Theobroma cacao
Thecc1EG034018 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1105351-1107350 Theobroma cacao
Thecc1EG034018 2.0kb downstream 2.0kb downstream 8091 true scaffold_8: 1107351-1115441 Theobroma cacao
Thecc1EG034018 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1113442-1115441 Theobroma cacao
Thecc1EG034018 5.0kb upstream 5.0kb upstream 11091 true scaffold_8: 1102351-1113441 Theobroma cacao
Thecc1EG034018 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1102351-1107350 Theobroma cacao
Thecc1EG034018 5.0kb downstream 5.0kb downstream 11091 true scaffold_8: 1107351-1118441 Theobroma cacao
Thecc1EG034018 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1113442-1118441 Theobroma cacao
Thecc1EG034018 10.0kb upstream 10.0kb upstream 16091 true scaffold_8: 1097351-1113441 Theobroma cacao
Thecc1EG034018 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1097351-1107350 Theobroma cacao
Thecc1EG034018 10.0kb downstream 10.0kb downstream 16091 true scaffold_8: 1107351-1123441 Theobroma cacao
Thecc1EG034018 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1113442-1123441 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027142 5273 Angiosperm View MSA
123834717 5264 Brassicales-Malvales View MSA
124337066 5266 SBM View MSA
124242612 5268 Malvidae View MSA
124068707 5270 Rosid View MSA
123753359 5271 Pentapetalae View MSA
122796563 5272 Eudicot View MSA
121296838 5274 Embryophyte View MSA
123334950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain