Gene : Thecc1EG033970 T. cacao v1.1
Defline:  (1 of 2) PTHR11685:SF119 - E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED Genomic Order:  195
Name:  ? Thecc1EG033970 Secondary Identifier:  ? PAC:27456521
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033970 0.5kb upstream 0.5kb upstream 4229 true scaffold_8: 906264-910492 Theobroma cacao
Thecc1EG033970 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 909993-910492 Theobroma cacao
Thecc1EG033970 0.5kb downstream 0.5kb downstream 4229 true scaffold_8: 905764-909992 Theobroma cacao
Thecc1EG033970 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 905764-906263 Theobroma cacao
Thecc1EG033970 1.0kb upstream 1.0kb upstream 4729 true scaffold_8: 906264-910992 Theobroma cacao
Thecc1EG033970 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 909993-910992 Theobroma cacao
Thecc1EG033970 1.0kb downstream 1.0kb downstream 4729 true scaffold_8: 905264-909992 Theobroma cacao
Thecc1EG033970 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 905264-906263 Theobroma cacao
Thecc1EG033970 2.0kb upstream 2.0kb upstream 5729 true scaffold_8: 906264-911992 Theobroma cacao
Thecc1EG033970 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 909993-911992 Theobroma cacao
Thecc1EG033970 2.0kb downstream 2.0kb downstream 5729 true scaffold_8: 904264-909992 Theobroma cacao
Thecc1EG033970 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 904264-906263 Theobroma cacao
Thecc1EG033970 5.0kb upstream 5.0kb upstream 8729 true scaffold_8: 906264-914992 Theobroma cacao
Thecc1EG033970 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 909993-914992 Theobroma cacao
Thecc1EG033970 5.0kb downstream 5.0kb downstream 8729 true scaffold_8: 901264-909992 Theobroma cacao
Thecc1EG033970 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 901264-906263 Theobroma cacao
Thecc1EG033970 10.0kb upstream 10.0kb upstream 13729 true scaffold_8: 906264-919992 Theobroma cacao
Thecc1EG033970 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 909993-919992 Theobroma cacao
Thecc1EG033970 10.0kb downstream 10.0kb downstream 13729 true scaffold_8: 896264-909992 Theobroma cacao
Thecc1EG033970 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 896264-906263 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030769 5273 Angiosperm View MSA
123842862 5264 Brassicales-Malvales View MSA
124349300 5266 SBM View MSA
124256460 5268 Malvidae View MSA
124075241 5270 Rosid View MSA
123755072 5271 Pentapetalae View MSA
122776380 5272 Eudicot View MSA
121299901 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain