Gene : Thecc1EG034215 T. cacao v1.1
Defline:  (1 of 2) PTHR31681//PTHR31681:SF1 - FAMILY NOT NAMED // C2H2-LIKE ZINC FINGER PROTEIN Genomic Order:  417
Name:  ? Thecc1EG034215 Secondary Identifier:  ? PAC:27457330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034215 0.5kb upstream 0.5kb upstream 3101 true scaffold_8: 1969271-1972371 Theobroma cacao
Thecc1EG034215 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1969271-1969770 Theobroma cacao
Thecc1EG034215 0.5kb downstream 0.5kb downstream 3101 true scaffold_8: 1969771-1972871 Theobroma cacao
Thecc1EG034215 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1972372-1972871 Theobroma cacao
Thecc1EG034215 1.0kb upstream 1.0kb upstream 3601 true scaffold_8: 1968771-1972371 Theobroma cacao
Thecc1EG034215 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1968771-1969770 Theobroma cacao
Thecc1EG034215 1.0kb downstream 1.0kb downstream 3601 true scaffold_8: 1969771-1973371 Theobroma cacao
Thecc1EG034215 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1972372-1973371 Theobroma cacao
Thecc1EG034215 2.0kb upstream 2.0kb upstream 4601 true scaffold_8: 1967771-1972371 Theobroma cacao
Thecc1EG034215 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1967771-1969770 Theobroma cacao
Thecc1EG034215 2.0kb downstream 2.0kb downstream 4601 true scaffold_8: 1969771-1974371 Theobroma cacao
Thecc1EG034215 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1972372-1974371 Theobroma cacao
Thecc1EG034215 5.0kb upstream 5.0kb upstream 7601 true scaffold_8: 1964771-1972371 Theobroma cacao
Thecc1EG034215 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1964771-1969770 Theobroma cacao
Thecc1EG034215 5.0kb downstream 5.0kb downstream 7601 true scaffold_8: 1969771-1977371 Theobroma cacao
Thecc1EG034215 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1972372-1977371 Theobroma cacao
Thecc1EG034215 10.0kb upstream 10.0kb upstream 12601 true scaffold_8: 1959771-1972371 Theobroma cacao
Thecc1EG034215 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1959771-1969770 Theobroma cacao
Thecc1EG034215 10.0kb downstream 10.0kb downstream 12601 true scaffold_8: 1969771-1982371 Theobroma cacao
Thecc1EG034215 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1972372-1982371 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837543 5264 Brassicales-Malvales View MSA
124343594 5266 SBM View MSA
124251352 5268 Malvidae View MSA
124070076 5270 Rosid View MSA
123749961 5271 Pentapetalae View MSA
122794210 5272 Eudicot View MSA
122050191 5273 Angiosperm View MSA
121349444 5274 Embryophyte View MSA
123381313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain