Gene : Thecc1EG034144 T. cacao v1.1
Defline:  (1 of 3) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) Genomic Order:  352
Name:  ? Thecc1EG034144 Secondary Identifier:  ? PAC:27459296
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034144 0.5kb upstream 0.5kb upstream 6432 true scaffold_8: 1622591-1629022 Theobroma cacao
Thecc1EG034144 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1628523-1629022 Theobroma cacao
Thecc1EG034144 0.5kb downstream 0.5kb downstream 6432 true scaffold_8: 1622091-1628522 Theobroma cacao
Thecc1EG034144 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1622091-1622590 Theobroma cacao
Thecc1EG034144 1.0kb upstream 1.0kb upstream 6932 true scaffold_8: 1622591-1629522 Theobroma cacao
Thecc1EG034144 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1628523-1629522 Theobroma cacao
Thecc1EG034144 1.0kb downstream 1.0kb downstream 6932 true scaffold_8: 1621591-1628522 Theobroma cacao
Thecc1EG034144 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1621591-1622590 Theobroma cacao
Thecc1EG034144 2.0kb upstream 2.0kb upstream 7932 true scaffold_8: 1622591-1630522 Theobroma cacao
Thecc1EG034144 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1628523-1630522 Theobroma cacao
Thecc1EG034144 2.0kb downstream 2.0kb downstream 7932 true scaffold_8: 1620591-1628522 Theobroma cacao
Thecc1EG034144 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1620591-1622590 Theobroma cacao
Thecc1EG034144 5.0kb upstream 5.0kb upstream 10932 true scaffold_8: 1622591-1633522 Theobroma cacao
Thecc1EG034144 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1628523-1633522 Theobroma cacao
Thecc1EG034144 5.0kb downstream 5.0kb downstream 10932 true scaffold_8: 1617591-1628522 Theobroma cacao
Thecc1EG034144 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1617591-1622590 Theobroma cacao
Thecc1EG034144 10.0kb upstream 10.0kb upstream 15932 true scaffold_8: 1622591-1638522 Theobroma cacao
Thecc1EG034144 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1628523-1638522 Theobroma cacao
Thecc1EG034144 10.0kb downstream 10.0kb downstream 15932 true scaffold_8: 1612591-1628522 Theobroma cacao
Thecc1EG034144 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1612591-1622590 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822470 5264 Brassicales-Malvales Singleton cluster - no MSA
124318604 5266 SBM Singleton cluster - no MSA
124248996 5268 Malvidae View MSA
124068022 5270 Rosid View MSA
123750852 5271 Pentapetalae View MSA
122787725 5272 Eudicot View MSA
122046406 5273 Angiosperm View MSA
121345159 5274 Embryophyte View MSA
123428224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain