Gene : Thecc1EG034135 T. cacao v1.1
Defline:  (1 of 1) PTHR11654//PTHR11654:SF21 - OLIGOPEPTIDE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  344
Name:  ? Thecc1EG034135 Secondary Identifier:  ? PAC:27457501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034135 0.5kb upstream 0.5kb upstream 5378 true scaffold_8: 1578737-1584114 Theobroma cacao
Thecc1EG034135 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1578737-1579236 Theobroma cacao
Thecc1EG034135 0.5kb downstream 0.5kb downstream 5378 true scaffold_8: 1579237-1584614 Theobroma cacao
Thecc1EG034135 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1584115-1584614 Theobroma cacao
Thecc1EG034135 1.0kb upstream 1.0kb upstream 5878 true scaffold_8: 1578237-1584114 Theobroma cacao
Thecc1EG034135 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1578237-1579236 Theobroma cacao
Thecc1EG034135 1.0kb downstream 1.0kb downstream 5878 true scaffold_8: 1579237-1585114 Theobroma cacao
Thecc1EG034135 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1584115-1585114 Theobroma cacao
Thecc1EG034135 2.0kb upstream 2.0kb upstream 6878 true scaffold_8: 1577237-1584114 Theobroma cacao
Thecc1EG034135 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1577237-1579236 Theobroma cacao
Thecc1EG034135 2.0kb downstream 2.0kb downstream 6878 true scaffold_8: 1579237-1586114 Theobroma cacao
Thecc1EG034135 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1584115-1586114 Theobroma cacao
Thecc1EG034135 5.0kb upstream 5.0kb upstream 9878 true scaffold_8: 1574237-1584114 Theobroma cacao
Thecc1EG034135 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1574237-1579236 Theobroma cacao
Thecc1EG034135 5.0kb downstream 5.0kb downstream 9878 true scaffold_8: 1579237-1589114 Theobroma cacao
Thecc1EG034135 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1584115-1589114 Theobroma cacao
Thecc1EG034135 10.0kb upstream 10.0kb upstream 14878 true scaffold_8: 1569237-1584114 Theobroma cacao
Thecc1EG034135 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1569237-1579236 Theobroma cacao
Thecc1EG034135 10.0kb downstream 10.0kb downstream 14878 true scaffold_8: 1579237-1594114 Theobroma cacao
Thecc1EG034135 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1584115-1594114 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822156 5264 Brassicales-Malvales Singleton cluster - no MSA
124318304 5266 SBM Singleton cluster - no MSA
124253636 5268 Malvidae View MSA
124050773 5270 Rosid View MSA
123753488 5271 Pentapetalae View MSA
122795216 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain