Gene : Thecc1EG034373 T. cacao v1.1
Defline:  (1 of 4) K01184 - polygalacturonase (E3.2.1.15) Genomic Order:  566
Name:  ? Thecc1EG034373 Secondary Identifier:  ? PAC:27457666
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034373 0.5kb upstream 0.5kb upstream 3813 true scaffold_8: 2659833-2663645 Theobroma cacao
Thecc1EG034373 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2659833-2660332 Theobroma cacao
Thecc1EG034373 0.5kb downstream 0.5kb downstream 3813 true scaffold_8: 2660333-2664145 Theobroma cacao
Thecc1EG034373 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2663646-2664145 Theobroma cacao
Thecc1EG034373 1.0kb upstream 1.0kb upstream 4313 true scaffold_8: 2659333-2663645 Theobroma cacao
Thecc1EG034373 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2659333-2660332 Theobroma cacao
Thecc1EG034373 1.0kb downstream 1.0kb downstream 4313 true scaffold_8: 2660333-2664645 Theobroma cacao
Thecc1EG034373 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2663646-2664645 Theobroma cacao
Thecc1EG034373 2.0kb upstream 2.0kb upstream 5313 true scaffold_8: 2658333-2663645 Theobroma cacao
Thecc1EG034373 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2658333-2660332 Theobroma cacao
Thecc1EG034373 2.0kb downstream 2.0kb downstream 5313 true scaffold_8: 2660333-2665645 Theobroma cacao
Thecc1EG034373 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2663646-2665645 Theobroma cacao
Thecc1EG034373 5.0kb upstream 5.0kb upstream 8313 true scaffold_8: 2655333-2663645 Theobroma cacao
Thecc1EG034373 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2655333-2660332 Theobroma cacao
Thecc1EG034373 5.0kb downstream 5.0kb downstream 8313 true scaffold_8: 2660333-2668645 Theobroma cacao
Thecc1EG034373 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2663646-2668645 Theobroma cacao
Thecc1EG034373 10.0kb upstream 10.0kb upstream 13313 true scaffold_8: 2650333-2663645 Theobroma cacao
Thecc1EG034373 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2650333-2660332 Theobroma cacao
Thecc1EG034373 10.0kb downstream 10.0kb downstream 13313 true scaffold_8: 2660333-2673645 Theobroma cacao
Thecc1EG034373 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2663646-2673645 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841125 5264 Brassicales-Malvales View MSA
124351120 5266 SBM View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain