Gene : Thecc1EG034363 T. cacao v1.1

Defline:  T23E18.18 Genomic Order:  556
Name:  ? Thecc1EG034363 Secondary Identifier:  ? PAC:27456428

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034363 0.5kb upstream 0.5kb upstream 3217 true scaffold_8: 2613749-2616965 Theobroma cacao
Thecc1EG034363 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2616466-2616965 Theobroma cacao
Thecc1EG034363 0.5kb downstream 0.5kb downstream 3217 true scaffold_8: 2613249-2616465 Theobroma cacao
Thecc1EG034363 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2613249-2613748 Theobroma cacao
Thecc1EG034363 1.0kb upstream 1.0kb upstream 3717 true scaffold_8: 2613749-2617465 Theobroma cacao
Thecc1EG034363 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2616466-2617465 Theobroma cacao
Thecc1EG034363 1.0kb downstream 1.0kb downstream 3717 true scaffold_8: 2612749-2616465 Theobroma cacao
Thecc1EG034363 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2612749-2613748 Theobroma cacao
Thecc1EG034363 2.0kb upstream 2.0kb upstream 4717 true scaffold_8: 2613749-2618465 Theobroma cacao
Thecc1EG034363 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2616466-2618465 Theobroma cacao
Thecc1EG034363 2.0kb downstream 2.0kb downstream 4717 true scaffold_8: 2611749-2616465 Theobroma cacao
Thecc1EG034363 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2611749-2613748 Theobroma cacao
Thecc1EG034363 5.0kb upstream 5.0kb upstream 7717 true scaffold_8: 2613749-2621465 Theobroma cacao
Thecc1EG034363 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2616466-2621465 Theobroma cacao
Thecc1EG034363 5.0kb downstream 5.0kb downstream 7717 true scaffold_8: 2608749-2616465 Theobroma cacao
Thecc1EG034363 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2608749-2613748 Theobroma cacao
Thecc1EG034363 10.0kb upstream 10.0kb upstream 12717 true scaffold_8: 2613749-2626465 Theobroma cacao
Thecc1EG034363 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2616466-2626465 Theobroma cacao
Thecc1EG034363 10.0kb downstream 10.0kb downstream 12717 true scaffold_8: 2603749-2616465 Theobroma cacao
Thecc1EG034363 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2603749-2613748 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838266 5264 Brassicales-Malvales View MSA
124338869 5266 SBM View MSA
124240419 5268 Malvidae View MSA
124061469 5270 Rosid View MSA
123742700 5271 Pentapetalae View MSA
122787485 5272 Eudicot View MSA
122042431 5273 Angiosperm View MSA
121345631 5274 Embryophyte View MSA
123380247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain